prompt changes

* fix(agents): collapse repeated waits queued inside one model turn

* fix(agents): state that one wait is enough in every prompt variant

---------

Co-authored-by: Ahmed Allam <ahmed39652003@gmail.com>

containers/Dockerfile

@@ -16,7 +16,8 @@ RUN mkdir -p /out/bin && \
     go install -v github.com/projectdiscovery/katana/cmd/katana@latest && \
     go install -v github.com/projectdiscovery/cvemap/cmd/vulnx@latest && \
     go install -v github.com/jaeles-project/gospider@latest && \
-    go install -v github.com/projectdiscovery/interactsh/cmd/interactsh-client@latest
+    go install -v github.com/projectdiscovery/interactsh/cmd/interactsh-client@latest && \
+    go install -v golang.org/x/vuln/cmd/govulncheck@latest
 
 # ---------------------------------------------------------------------------
 # Runtime stage
@@ -53,6 +54,7 @@ RUN apt-get update && \
     nmap ncat ndiff \
     sqlmap nuclei subfinder naabu ffuf \
     nodejs npm pipx \
+    golang-go \
     libcap2-bin \
     gdb \
     libnss3-tools \

pyproject.toml

@@ -47,7 +47,7 @@ dependencies = [
   "pypdf>=5.0",
   # Cap <49: 49.x drops the universal2 macOS wheel (arm64-only), which breaks
   # the Intel macOS (macos-x86_64) release build's `uv sync --frozen`.
-  "cryptography>=48.0.1,<51",
+  "cryptography>=48.0.1,<49",
   "pyyaml>=6.0",
 ]
 
@@ -236,6 +236,9 @@ ignore = [
 "strix/interface/auth_cli.py" = ["N802"]
 "tests/test_codex_streaming.py" = ["N802"]
 "tests/test_disable_streaming.py" = ["N802"]
+"tests/test_tool_call_ids.py" = ["N802"]
+"tests/test_tool_call_limits.py" = ["N802", "SLF001"]
+"tests/test_stream_idle_timeout.py" = ["N802", "SLF001"]
 "tests/test_unknown_tool_recovery.py" = ["N802"]
 "tests/test_report_pdf.py" = ["S105", "S106"]
 # Stdlib HTTP handler overrides (do_GET/do_POST) and lazy imports that avoid a

strix/agents/factory.py

@@ -559,7 +559,7 @@ def registered_agent_tools() -> tuple[Tool, ...]:
 
 def build_strix_agent(
     *,
-    name: str = "strix",
+    name: str = "agent",
     skills: list[str] | None = None,
     is_root: bool,
     scan_mode: str = "deep",

strix/agents/prompts/system_prompt.jinja

@@ -1,4 +1,4 @@
-You are Strix, an advanced AI application security validation agent developed by OmniSecure Labs. Your purpose is to perform authorized security verification, reproduce and validate weaknesses on in-scope assets, and help remediate real security issues.
+You are an advanced AI application security validation agent. Your purpose is to perform authorized security verification, reproduce and validate weaknesses on in-scope assets, and help remediate real security issues.
 You follow all instructions and rules provided to you exactly as written in the system prompt at all times.
 {% if is_root %}
 <root_agent_directive>
@@ -22,12 +22,13 @@ CLI OUTPUT:
 - You may use simple markdown: **bold**, *italic*, `code`, ~~strikethrough~~, [links](url), and # headers
 - Do NOT use complex markdown like bullet lists, numbered lists, or tables
 - Use line breaks and indentation for structure
-- NEVER use "Strix" or any identifiable names/markers in HTTP requests, payloads, user-agents, or any inputs
+- NEVER use any identifiable names/markers in HTTP requests, payloads, user-agents, or any inputs
 
 INTER-AGENT MESSAGES:
 - Messages from other agents arrive prefixed with a header like `[Message from agent <name> | type=... | priority=...]`. Treat them as internal context — never repeat them verbatim in your own output.
 - Treat agent identity / inherited-context preambles as internal metadata; do not echo them in outputs or tool calls.
 - Minimize inter-agent messaging: only message when essential for coordination or assistance; avoid routine status updates; batch non-urgent information; prefer parent/child completion flows and shared artifacts over messaging
+- wait_for_agents blocks and resumes you automatically, so it is never a poll you repeat: issue exactly ONE wait, then stop and react to what it returns. Never write out a wait/check loop (wait → view_agent_graph → wait → ...) ahead of time — those extra calls only strand you and are collapsed anyway
 
 {% if interactive %}
 INTERACTIVE BEHAVIOR:
@@ -57,7 +58,7 @@ AUTONOMOUS BEHAVIOR:
 <execution_guidelines>
 {% if system_prompt_context and system_prompt_context.authorized_targets %}
 SYSTEM-VERIFIED SCOPE:
-- The following scope metadata is injected by the Strix platform into the system prompt and is authoritative
+- The following scope metadata is injected by the platform into the system prompt and is authoritative
 - Scope source: {{ system_prompt_context.scope_source }}
 - Authorization source: {{ system_prompt_context.authorization_source }}
 - Every target listed below has already been verified by the platform as in-scope and authorized

strix/config/models.py

@@ -2,11 +2,14 @@
 
 from __future__ import annotations
 
+import asyncio
 import contextlib
 import inspect
+import logging
 import os
 import time
-from typing import TYPE_CHECKING, Any
+from collections.abc import AsyncGenerator
+from typing import TYPE_CHECKING, Any, cast
 
 from agents import (
     set_default_openai_api,
@@ -24,12 +27,19 @@ from agents.retry import (
     RetryPolicyContext,
     retry_policies,
 )
-from openai.types.responses import Response, ResponseCompletedEvent
+from openai.types.responses import (
+    Response,
+    ResponseCompletedEvent,
+    ResponseOutputItemAddedEvent,
+    ResponseOutputItemDoneEvent,
+)
 from openai.types.responses.response_usage import ResponseUsage
 from openai.types.shared import Reasoning
 
 from strix.config import codex
 from strix.config.loader import load_settings
+from strix.config.tool_call_ids import TurnCallIdRewriter, dedupe_input
+from strix.config.tool_call_limits import TurnToolCallLimiter
 
 
 if TYPE_CHECKING:
@@ -48,6 +58,9 @@ if TYPE_CHECKING:
     from strix.config.settings import LlmSettings, ReasoningEffort, Settings
 
 
+logger = logging.getLogger(__name__)
+
+
 def request_timeout_extra_args(timeout_s: float | None) -> dict[str, float] | None:
     """Per-request model timeout; a plain float so ``ModelSettings.to_json_dict()`` stays serializable."""  # noqa: E501
     if not timeout_s or timeout_s <= 0:
@@ -229,6 +242,170 @@ class _NonStreamingModel(Model):
         yield _completed_stream_event(response, getattr(self._inner, "model", None))
 
 
+class _TurnGuardModel(Model):
+    """Keep one turn from corrupting the conversation or running away.
+
+    Tool-call ids: providers that number calls per turn (``exec_command:0``,
+    ...) restart the counter each turn, so the same id eventually appears twice
+    in one conversation and strict providers reject every subsequent request.
+    Ids that collide with the history are rewritten before the turn is
+    recorded, and already-corrupted histories are repaired on the way out.
+
+    Tool-call volume: a degenerate response can queue hundreds of calls that
+    the run loop then honours one by one. Only the first
+    ``LLM_MAX_TOOL_CALLS_PER_TURN`` calls of a response are kept.
+
+    Stalled streams: a turn that emits a few tokens and then goes silent is
+    not covered by the request timeout, which resets on any byte (keepalives
+    included). ``LLM_STREAM_IDLE_TIMEOUT`` bounds the gap between events so the
+    turn fails instead of hanging, and the existing retry path replays it.
+    """
+
+    def __init__(
+        self,
+        inner: Model,
+        *,
+        max_tool_calls_per_turn: int = 0,
+        stream_idle_timeout: float = 0.0,
+    ) -> None:
+        self._inner = inner
+        self._max_tool_calls_per_turn = max_tool_calls_per_turn
+        self._stream_idle_timeout = stream_idle_timeout
+
+    def _limiter(self) -> TurnToolCallLimiter:
+        return TurnToolCallLimiter(self._max_tool_calls_per_turn)
+
+    def _log_dropped(self, limiter: TurnToolCallLimiter) -> None:
+        if limiter.dropped:
+            logger.warning(
+                "dropped %d tool call(s) past the per-response limit of %d",
+                limiter.dropped,
+                self._max_tool_calls_per_turn,
+            )
+
+    async def close(self) -> None:
+        await self._inner.close()
+
+    def get_retry_advice(self, request: ModelRetryAdviceRequest) -> ModelRetryAdvice | None:
+        return self._inner.get_retry_advice(request)
+
+    async def get_response(
+        self,
+        system_instructions: str | None,
+        input: str | list[TResponseInputItem],  # noqa: A002
+        model_settings: ModelSettings,
+        tools: list[Tool],
+        output_schema: AgentOutputSchemaBase | None,
+        handoffs: list[Handoff],
+        tracing: ModelTracing,
+        *,
+        previous_response_id: str | None,
+        conversation_id: str | None,
+        prompt: ResponsePromptParam | None,
+    ) -> ModelResponse:
+        sanitized = dedupe_input(input)
+        rewriter = TurnCallIdRewriter(sanitized)
+        response = await self._inner.get_response(
+            system_instructions,
+            cast("str | list[TResponseInputItem]", sanitized),
+            model_settings,
+            tools,
+            output_schema,
+            handoffs,
+            tracing,
+            previous_response_id=previous_response_id,
+            conversation_id=conversation_id,
+            prompt=prompt,
+        )
+        limiter = self._limiter()
+        response.output = limiter.filter_items(rewriter.rewrite_items(list(response.output)))
+        self._log_dropped(limiter)
+        return response
+
+    async def stream_response(
+        self,
+        system_instructions: str | None,
+        input: str | list[TResponseInputItem],  # noqa: A002
+        model_settings: ModelSettings,
+        tools: list[Tool],
+        output_schema: AgentOutputSchemaBase | None,
+        handoffs: list[Handoff],
+        tracing: ModelTracing,
+        *,
+        previous_response_id: str | None,
+        conversation_id: str | None,
+        prompt: ResponsePromptParam | None,
+    ) -> AsyncIterator[TResponseStreamEvent]:
+        sanitized = dedupe_input(input)
+        rewriter = TurnCallIdRewriter(sanitized)
+        limiter = self._limiter()
+        stream = self._inner.stream_response(
+            system_instructions,
+            cast("str | list[TResponseInputItem]", sanitized),
+            model_settings,
+            tools,
+            output_schema,
+            handoffs,
+            tracing,
+            previous_response_id=previous_response_id,
+            conversation_id=conversation_id,
+            prompt=prompt,
+        )
+        async for event in _with_idle_timeout(stream, self._stream_idle_timeout):
+            guarded = _guard_event(event, rewriter, limiter)
+            if guarded is not None:
+                yield guarded
+        self._log_dropped(limiter)
+
+
+async def _aclose(stream: AsyncIterator[TResponseStreamEvent]) -> None:
+    if isinstance(stream, AsyncGenerator):
+        with contextlib.suppress(Exception):
+            await stream.aclose()
+
+
+async def _with_idle_timeout(
+    stream: AsyncIterator[TResponseStreamEvent], timeout: float
+) -> AsyncIterator[TResponseStreamEvent]:
+    if timeout <= 0:
+        async for event in stream:
+            yield event
+        return
+
+    iterator = stream.__aiter__()
+    while True:
+        try:
+            event = await asyncio.wait_for(iterator.__anext__(), timeout)
+        except StopAsyncIteration:
+            return
+        except TimeoutError:
+            await _aclose(stream)
+            message = f"model stream produced no event for {timeout:.0f}s"
+            logger.warning("%s; abandoning the turn", message)
+            raise TimeoutError(message) from None
+        yield event
+
+
+def _guard_event(
+    event: TResponseStreamEvent, rewriter: TurnCallIdRewriter, limiter: TurnToolCallLimiter
+) -> TResponseStreamEvent | None:
+    if isinstance(event, ResponseOutputItemAddedEvent | ResponseOutputItemDoneEvent):
+        rewritten = rewriter.rewrite_item(event.item)
+        if not limiter.allow(rewritten):
+            return None
+        if rewritten is not event.item:
+            return event.model_copy(update={"item": rewritten})
+        return event
+    if isinstance(event, ResponseCompletedEvent):
+        original = list(event.response.output)
+        output = limiter.filter_items(rewriter.rewrite_items(original))
+        if output != original:
+            return event.model_copy(
+                update={"response": event.response.model_copy(update={"output": output})}
+            )
+    return event
+
+
 def _completed_stream_event(
     model_response: ModelResponse, model_name: object | None
 ) -> TResponseStreamEvent:
@@ -294,19 +471,29 @@ class StrixProvider(MultiProvider):
     def get_model(self, model_name: str | None) -> Model:
         llm = load_settings().llm
         slug = codex.subscription_model(model_name)
+        idle_timeout = float(llm.stream_idle_timeout)
         if slug:
             # The ChatGPT subscription backend is always streamed; it has no
             # non-streaming mode to fall back to, so LLM_DISABLE_STREAMING
             # does not apply here.
-            return _CodexResponsesModel(
+            model: Model = _CodexResponsesModel(
                 slug,
                 codex.get_subscription_client(),
                 reasoning_effort=llm.reasoning_effort,
             )
-        model = super().get_model(model_name)
-        if llm.disable_streaming:
-            return _NonStreamingModel(model)
-        return model
+        else:
+            model = super().get_model(model_name)
+            if llm.disable_streaming:
+                model = _NonStreamingModel(model)
+                # The wrapper emits its single event only once the whole request
+                # is done, so an idle gap is meaningless here; the request
+                # timeout bounds it instead.
+                idle_timeout = 0.0
+        return _TurnGuardModel(
+            model,
+            max_tool_calls_per_turn=llm.max_tool_calls_per_turn,
+            stream_idle_timeout=idle_timeout,
+        )
 
 
 DEFAULT_MODEL_RETRY = ModelRetrySettings(

strix/config/settings.py

@@ -57,6 +57,12 @@ class LlmSettings(BaseSettings):
         alias="LLM_DISABLE_STREAMING",
     )
     timeout: int = Field(default=300, alias="LLM_TIMEOUT")
+    stream_idle_timeout: int = Field(default=300, ge=0, alias="LLM_STREAM_IDLE_TIMEOUT")
+    max_tool_calls_per_turn: int = Field(
+        default=32,
+        ge=0,
+        alias="LLM_MAX_TOOL_CALLS_PER_TURN",
+    )
 
 
 class DedupeSettings(BaseSettings):

strix/config/tool_call_ids.py

@@ -0,0 +1,117 @@
+"""Keep tool-call ids unique within a conversation.
+
+Some providers return per-turn tool-call ids (``exec_command:0``,
+``exec_command:1``, ...) whose counter restarts on every turn. Once the same
+id appears twice in one conversation, the request payload has two assistant
+tool calls sharing an id and strict providers reject the whole turn, which
+permanently kills the agent because the malformed history is replayed on
+every retry. Rewriting duplicates to fresh unique ids keeps the history
+valid for any provider.
+"""
+
+from __future__ import annotations
+
+from collections import defaultdict, deque
+from typing import Any
+from uuid import uuid4
+
+from openai.types.responses import ResponseFunctionToolCall
+
+
+def new_call_id() -> str:
+    return f"call_{uuid4().hex}"
+
+
+def collect_call_ids(items: list[Any]) -> set[str]:
+    used: set[str] = set()
+    for item in items:
+        if isinstance(item, dict):
+            call_id = item.get("call_id")
+            if isinstance(call_id, str):
+                used.add(call_id)
+        elif isinstance(item, ResponseFunctionToolCall):
+            used.add(item.call_id)
+    return used
+
+
+def dedupe_history_call_ids(items: list[Any]) -> tuple[list[Any], bool]:
+    """Rewrite duplicate call ids in a conversation history.
+
+    Outputs are paired with their call by order, so parallel calls that share
+    an id keep answering the right call after the rewrite.
+    """
+    used: set[str] = set()
+    pending: dict[str, deque[str]] = defaultdict(deque)
+    rebuilt: list[Any] = []
+    changed = False
+
+    for item in items:
+        if not isinstance(item, dict):
+            rebuilt.append(item)
+            continue
+        call_id = item.get("call_id")
+        if not isinstance(call_id, str):
+            rebuilt.append(item)
+            continue
+
+        kind = item.get("type")
+        if kind == "function_call":
+            effective = call_id
+            if call_id in used:
+                effective = new_call_id()
+                item = {**item, "call_id": effective}  # noqa: PLW2901
+                changed = True
+            used.add(effective)
+            pending[call_id].append(effective)
+        elif kind == "function_call_output":
+            queue = pending.get(call_id)
+            if queue:
+                effective = queue.popleft()
+                if effective != call_id:
+                    item = {**item, "call_id": effective}  # noqa: PLW2901
+                    changed = True
+        rebuilt.append(item)
+
+    return rebuilt, changed
+
+
+def dedupe_input(model_input: str | list[Any]) -> str | list[Any]:
+    if isinstance(model_input, str):
+        return model_input
+    rebuilt, changed = dedupe_history_call_ids(model_input)
+    return rebuilt if changed else model_input
+
+
+class TurnCallIdRewriter:
+    """Rewrite a single turn's tool-call ids that collide with the history.
+
+    A turn's items surface several times (streamed item events, then the
+    completed response), so the same original id must always map to the same
+    replacement within the turn.
+    """
+
+    def __init__(self, model_input: str | list[Any]) -> None:
+        self._used = set() if isinstance(model_input, str) else collect_call_ids(model_input)
+        self._remap: dict[str, str] = {}
+        self._settled: set[str] = set()
+
+    def rewrite_item(self, item: Any) -> Any:
+        if not isinstance(item, ResponseFunctionToolCall):
+            return item
+        original = item.call_id
+        if original in self._settled:
+            return item
+        replacement = self._remap.get(original)
+        if replacement is None:
+            if original not in self._used:
+                self._used.add(original)
+                self._settled.add(original)
+                return item
+            replacement = new_call_id()
+            self._remap[original] = replacement
+            self._used.add(replacement)
+            self._settled.add(replacement)
+        return item.model_copy(update={"call_id": replacement})
+
+    def rewrite_items(self, items: list[Any]) -> list[Any]:
+        return [self.rewrite_item(item) for item in items]

strix/config/tool_call_limits.py

@@ -0,0 +1,46 @@
+"""Bound how many tool calls one assistant response may queue.
+
+A degenerate generation can emit hundreds or thousands of tool calls in a
+single response — typically a poll/wait loop the model writes out ahead of
+time instead of issuing one call and yielding. The run loop honours all of
+them, so the agent stops reacting to anything for hours. Keeping only the
+first ``limit`` calls of a response bounds that blast radius; the model sees
+their results on the next turn and can reconsider.
+"""
+
+from __future__ import annotations
+
+from typing import Any
+
+from openai.types.responses import ResponseFunctionToolCall
+
+
+class TurnToolCallLimiter:
+    """Decide, once per call, whether a turn's tool call is within the limit."""
+
+    def __init__(self, limit: int) -> None:
+        self._limit = limit
+        self._decisions: dict[str, bool] = {}
+        self._kept = 0
+        self.dropped = 0
+
+    @property
+    def enabled(self) -> bool:
+        return self._limit > 0
+
+    def allow(self, item: Any) -> bool:
+        if not self.enabled or not isinstance(item, ResponseFunctionToolCall):
+            return True
+        decided = self._decisions.get(item.call_id)
+        if decided is not None:
+            return decided
+        allowed = self._kept < self._limit
+        if allowed:
+            self._kept += 1
+        else:
+            self.dropped += 1
+        self._decisions[item.call_id] = allowed
+        return allowed
+
+    def filter_items(self, items: list[Any]) -> list[Any]:
+        return [item for item in items if self.allow(item)]

strix/core/execution.py

@@ -838,7 +838,7 @@ async def _append_tool_required_message(
         )
     else:
         message = (
-            "Your previous response ended the autonomous Strix run without a lifecycle tool "
+            "Your previous response ended the autonomous run without a lifecycle tool "
             "call. That is invalid in non-interactive mode; plain text final answers are "
             "ignored. Continue immediately and call exactly one tool. "
             f"If your work is complete, call {finish_tool}. "

strix/core/hooks.py

@@ -20,6 +20,8 @@ if TYPE_CHECKING:
 logger = logging.getLogger(__name__)
 
 
+LLM_TURN_KEY = "llm_turn"
+
 _STAGE_LABELS: tuple[str, ...] = ("NOTICE", "URGENT", "CRITICAL")
 _TURN_WARN_BANDS: tuple[float, ...] = (0.70, 0.85, 0.95)
 _ROOT_BUDGET_WARN_BANDS: tuple[float, ...] = (0.70, 0.85, 0.95)
@@ -144,6 +146,7 @@ class ReportUsageHooks(RunHooks[dict[str, Any]]):
         system_prompt: str | None,  # noqa: ARG002
         input_items: list[TResponseInputItem],
     ) -> None:
+        context.context[LLM_TURN_KEY] = int(context.context.get(LLM_TURN_KEY, 0)) + 1
         try:
             self._maybe_warn_turns(context, input_items)
             self._maybe_warn_budget(context, input_items)

strix/core/runner.py

@@ -293,7 +293,7 @@ async def run_strix_scan(
         )
 
         root_agent = build_strix_agent(
-            name="Strix",
+            name="Root Agent",
             skills=skills,
             is_root=True,
             scan_mode=scan_mode,
@@ -307,7 +307,7 @@ async def run_strix_scan(
         if not is_resume:
             await coordinator.register(
                 root_id,
-                "Strix",
+                "Root Agent",
                 parent_id=None,
                 task=root_task,
                 skills=skills,

strix/interface/tui/internal/app/model_test.go

@@ -1169,3 +1169,120 @@ func TestChatContentRerendersOnWidthAndExpansionChange(t *testing.T) {
 		}
 	}
 }
+
+// A model or backend failure can be a wrapped exception hundreds of columns
+// wide and several lines long. The status row is one line of the chat column, so
+// an oversized one widens the whole column - JoinHorizontal pads every row to the
+// widest - which pushed the sidebar off screen and wrapped the frame.
+func TestLongErrorDoesNotBreakTheFrame(t *testing.T) {
+	model := New(nil)
+	model.width, model.height = 120, 24
+	model.showSplash = false
+	model.handleEnvelope(stateEnvelope(t, 1, protocol.Snapshot{ScanState: "running"}))
+	bootstrap := protocol.CollectionBootstrap{
+		Collection: "agents", Revision: 1, Cursor: 0, NextCursor: 1, Done: true,
+		Items: []json.RawMessage{rawJSON(t, protocol.Agent{ID: "a0", Name: "Strix", Status: "running"})},
+	}
+	model.handleEnvelope(protocol.Envelope{
+		Version: protocol.Version, Type: "collection_bootstrap", Payload: rawJSON(t, bootstrap),
+	})
+	model.errorText = "litellm.APIConnectionError: OpenrouterException - Connection error " +
+		"while calling https://openrouter.ai/api/v1/chat/completions: HTTPSConnectionPool" +
+		"(host='openrouter.ai', port=443): Max retries exceeded\nTraceback (most recent " +
+		"call last):\n  File \"/x/y.py\", line 42, in send\n    raise err"
+	model.resizeViewport()
+
+	lines := strings.Split(model.View(), "\n")
+	if len(lines) > model.height {
+		t.Fatalf("frame is %d rows in a %d-row terminal", len(lines), model.height)
+	}
+	for i, line := range lines {
+		if width := ansi.StringWidth(line); width > model.width {
+			t.Fatalf("row %d is %d columns in a %d-column terminal", i, width, model.width)
+		}
+	}
+	// The sidebar has to survive: its panels are the right edge of the frame.
+	if !strings.Contains(ansi.Strip(model.View()), "Strix") {
+		t.Fatal("the agent tree was pushed out of the frame")
+	}
+}
+
+func TestStatusMessageFlattensAndKeepsItsHint(t *testing.T) {
+	row := ansi.Strip(statusMessage("boom\nsecond line\twith tabs", red, " · Send message to resume", 60))
+
+	if strings.Contains(row, "\n") || strings.Contains(row, "\t") {
+		t.Fatalf("status row is not a single line: %q", row)
+	}
+	if !strings.HasSuffix(row, " · Send message to resume") {
+		t.Fatalf("the hint was lost: %q", row)
+	}
+	if !strings.Contains(row, "boom second line with tabs") {
+		t.Fatalf("the message was mangled: %q", row)
+	}
+	// A message far too long for the row keeps the hint readable.
+	long := ansi.Strip(statusMessage(strings.Repeat("x", 500), red, " · Send message to resume", 60))
+	if width := ansi.StringWidth(long); width > 60 {
+		t.Fatalf("status message is %d columns, want at most 60", width)
+	}
+	if !strings.HasSuffix(long, " · Send message to resume") {
+		t.Fatalf("the hint was clipped away: %q", long)
+	}
+}
+
+// The status row must be exactly as wide as the column it sits in, at every
+// terminal size. A narrow terminal cannot fit the quit hint alongside any status
+// text, and keeping it anyway made the row wider than the terminal.
+func TestStatusRowIsExactlyItsWidth(t *testing.T) {
+	quitHint := lipgloss.NewStyle().Foreground(white).Render("ctrl-q") +
+		lipgloss.NewStyle().Foreground(dim).Render(" quit")
+	longMessage := lipgloss.NewStyle().Foreground(red).Render(strings.Repeat("boom ", 40))
+
+	for width := 1; width <= 60; width++ {
+		for _, testCase := range []struct {
+			name        string
+			left, right string
+		}{
+			{"empty", "", ""},
+			{"hint only", "", quitHint},
+			{"long message and hint", longMessage, quitHint},
+			{"long message alone", longMessage, ""},
+		} {
+			row := composeStatusRow(testCase.left, testCase.right, width)
+			if got := ansi.StringWidth(row); got != width {
+				t.Fatalf("%s at width %d rendered %d columns: %q",
+					testCase.name, width, got, ansi.Strip(row))
+			}
+			if strings.Contains(row, "\n") {
+				t.Fatalf("%s at width %d spans rows", testCase.name, width)
+			}
+		}
+	}
+	if row := composeStatusRow("x", "y", 0); row != "" {
+		t.Fatalf("a zero-width row should be empty, got %q", row)
+	}
+}
+
+// A running scan in a narrow terminal must not wrap the frame.
+func TestNarrowTerminalKeepsTheFrameIntact(t *testing.T) {
+	for _, width := range []int{8, 10, 13, 14, 20, 40} {
+		model := New(nil)
+		model.width, model.height = width, 20
+		model.showSplash = false
+		model.handleEnvelope(stateEnvelope(t, 1, protocol.Snapshot{ScanState: "running"}))
+		bootstrap := protocol.CollectionBootstrap{
+			Collection: "agents", Revision: 1, Cursor: 0, NextCursor: 1, Done: true,
+			Items: []json.RawMessage{rawJSON(t, protocol.Agent{ID: "a0", Name: "Strix", Status: "running"})},
+		}
+		model.handleEnvelope(protocol.Envelope{
+			Version: protocol.Version, Type: "collection_bootstrap", Payload: rawJSON(t, bootstrap),
+		})
+		model.errorText = strings.Repeat("connection failed ", 20)
+		model.resizeViewport()
+
+		for i, line := range strings.Split(model.View(), "\n") {
+			if got := ansi.StringWidth(line); got > width {
+				t.Fatalf("at width %d row %d is %d columns", width, i, got)
+			}
+		}
+	}
+}

strix/interface/tui/internal/app/setup.go

@@ -214,8 +214,11 @@ func (m *Model) setupLogAppend(line string) {
 }
 
 // setupMsg appends a styled feedback line (success green, error red, notice dim).
+// The log budgets rows by entry, so a message is flattened to one line first: a
+// wrapped exception would otherwise render as several rows and push the launch
+// column past the bottom of the terminal.
 func (m *Model) setupMsg(text string, style lipgloss.Style) {
-	m.setupLogAppend(style.Render(text))
+	m.setupLogAppend(style.Render(flattenStatus(text)))
 }
 
 // setupLogRows is how many feedback lines the launch column shows before the

strix/interface/tui/internal/app/setup_log_test.go

@@ -93,3 +93,25 @@ func TestFocusedPanelsCarryTheGreenBorder(t *testing.T) {
 		}
 	}
 }
+
+// A wrapped exception is several lines. The log budgets rows by entry, so it has
+// to become one row or the launch column grows past the terminal.
+func TestSetupLogKeepsMultiLineErrorsToOneRow(t *testing.T) {
+	model := New(nil)
+	model.width, model.height = 100, 26
+	model.showSplash = false
+	model.handleEnvelope(stateEnvelope(t, 1, protocol.Snapshot{SetupMode: true, ScanState: "setup"}))
+	model.setupMsg("boom\nTraceback (most recent call last):\n  File \"x.py\", line 1\n    raise", render.Col(red))
+	model.resizeViewport()
+
+	if entries := len(model.setupLog); entries != 1 {
+		t.Fatalf("one message became %d log entries", entries)
+	}
+	if strings.Contains(model.setupLog[0], "\n") {
+		t.Fatalf("log entry spans rows: %q", model.setupLog[0])
+	}
+	lines := strings.Split(model.View(), "\n")
+	if len(lines) > model.height {
+		t.Fatalf("start screen is %d rows in a %d-row terminal", len(lines), model.height)
+	}
+}

strix/interface/tui/internal/app/view.go

@@ -654,8 +654,7 @@ func (m Model) statusView(width int) string {
 		case "waiting":
 			left = lipgloss.NewStyle().Foreground(dim).Render("Send message to resume")
 			if msg := agent.ErrorMessage; msg != "" {
-				left = lipgloss.NewStyle().Foreground(red).Render(msg) +
-					lipgloss.NewStyle().Foreground(dim).Render(" · Send message to resume")
+				left = statusMessage(msg, red, " · Send message to resume", width)
 			}
 		case "budget_paused":
 			left = lipgloss.NewStyle().Foreground(amber).Render("Budget limit reached") +
@@ -670,15 +669,54 @@ func (m Model) statusView(width int) string {
 			if msg == "" {
 				msg = "Agent failed"
 			}
-			left = lipgloss.NewStyle().Foreground(red).Render(msg) +
-				lipgloss.NewStyle().Foreground(dim).Render(" · Send message to resume")
+			left = statusMessage(msg, red, " · Send message to resume", width)
 		}
 	}
 	if m.errorText != "" {
-		left = lipgloss.NewStyle().Foreground(red).Render(m.errorText)
+		left = statusMessage(m.errorText, red, "", width-lipgloss.Width(right))
 	}
-	gap := max(1, width-lipgloss.Width(left)-lipgloss.Width(right))
-	return " " + left + strings.Repeat(" ", max(1, gap-1)) + right
+	return composeStatusRow(left, right, width)
+}
+
+// composeStatusRow lays the status text and the corner hint on one row exactly
+// width columns wide. A wider row would widen the whole chat column, because
+// JoinHorizontal pads every row of a block to its widest, which pushes the
+// sidebar off screen and wraps the frame.
+func composeStatusRow(left, right string, width int) string {
+	if width <= 0 {
+		return ""
+	}
+	const leading = 1 // the row is indented one column, like the panels above it
+	// A terminal can be narrower than the hint itself. Drop the hint rather than
+	// keep it at the cost of the status, which is the part carrying information;
+	// ctrl-q works whether or not the row has room to say so.
+	if lipgloss.Width(right) > 0 && width < lipgloss.Width(right)+leading+2 {
+		right = ""
+	}
+	separator := 0
+	if lipgloss.Width(right) > 0 {
+		separator = 1
+	}
+	left = truncate(left, max(0, width-leading-lipgloss.Width(right)-separator))
+	padding := max(0, width-leading-lipgloss.Width(left)-lipgloss.Width(right))
+	return " " + left + strings.Repeat(" ", padding) + right
+}
+
+// statusMessage fits a message and its trailing hint on the one status row. A
+// model or backend error can be a wrapped exception several lines long, so it is
+// flattened to a single line and clipped, leaving the hint readable.
+func statusMessage(message string, color lipgloss.Color, hint string, width int) string {
+	styledHint := lipgloss.NewStyle().Foreground(dim).Render(hint)
+	room := max(1, width-2-lipgloss.Width(styledHint))
+	flat := truncate(flattenStatus(message), room)
+	return lipgloss.NewStyle().Foreground(color).Render(flat) + styledHint
+}
+
+// flattenStatus turns a multi-line message into one line, collapsing the runs of
+// whitespace that joining its lines leaves behind.
+func flattenStatus(message string) string {
+	message = strings.NewReplacer("\r\n", " ", "\r", " ", "\n", " ", "\t", " ").Replace(message)
+	return strings.Join(strings.Fields(message), " ")
 }
 
 func (m Model) sweepView() string {

strix/interface/tui/internal/app/vuln_report.go

@@ -74,6 +74,8 @@ func vulnerabilityMarkdownReport(v map[string]any) string {
 		field("Ecosystem", render.StringValue(dep["package_ecosystem"]))
 		field("Installed Version", render.StringValue(dep["installed_version"]))
 		field("Fixed Version", render.StringValue(dep["fixed_version"]))
+		field("Introduced By", render.StringValue(dep["introduced_by"]))
+		field("Dependency Chain", render.StringValue(dep["dependency_path"]))
 	}
 	field("Endpoint", render.StringValue(v["endpoint"]))
 	field("Method", render.StringValue(v["method"]))

strix/interface/tui/internal/app/vulnerabilities.go

@@ -298,6 +298,8 @@ func vulnerabilityBody(v map[string]any) string {
 		field("Ecosystem", render.StringValue(dep["package_ecosystem"]))
 		field("Installed Version", render.StringValue(dep["installed_version"]))
 		field("Fixed Version", render.StringValue(dep["fixed_version"]))
+		field("Introduced By", render.StringValue(dep["introduced_by"]))
+		field("Dependency Chain", render.StringValue(dep["dependency_path"]))
 	}
 	field("Endpoint", render.StringValue(v["endpoint"]))
 	field("Method", render.StringValue(v["method"]))

strix/interface/tui/internal/render/dependency.go

@@ -57,6 +57,12 @@ func renderDependencyReport(args map[string]any, result any) string {
 	section("Description", StringValue(args["description"]))
 	section("Impact", StringValue(args["impact"]))
 	section("Technical Analysis", StringValue(args["technical_analysis"]))
+	if reach := StringValue(args["reachability"]); reach != "" && reach != "unknown" {
+		b.WriteString("\n\n" + Bold(Field).Render("Usage evidence: ") + reach)
+		if ev := StringValue(args["reachability_evidence"]); ev != "" {
+			b.WriteString("\n" + ev)
+		}
+	}
 	section("Assumptions", StringValue(args["assumptions"]))
 	section("Remediation", StringValue(args["remediation_steps"]))
 	if title == "" {

strix/interface/tui/live_view.py

@@ -431,7 +431,7 @@ _INTERNAL_TURN_PREFIXES = (
     "== Inherited context from parent",
     # strix.core.execution: the no-tool-call recovery nudge, both modes.
     "Your previous message ended a turn without a tool call.",
-    "Your previous response ended the autonomous Strix run without a lifecycle tool call.",
+    "Your previous response ended the autonomous run without a lifecycle tool call.",
     # strix.core.hooks: budget warnings, the only notices injected unwrapped.
     *(
         f"[{label}] {subject}"

strix/interface/utils.py

@@ -1102,7 +1102,7 @@ def resolve_diff_scope_context(
 def _is_http_git_repo(url: str) -> bool:
     check_url = f"{url.rstrip('/')}/info/refs?service=git-upload-pack"
     try:
-        with requests.get(check_url, headers={"User-Agent": "git/strix"}, timeout=10) as resp:
+        with requests.get(check_url, headers={"User-Agent": "git/2.43.0"}, timeout=10) as resp:
             if resp.status_code >= 400:
                 return resp.status_code == 401
             return "x-git-upload-pack-advertisement" in resp.headers.get("Content-Type", "")

strix/report/dedupe.py

@@ -183,6 +183,24 @@ def _dependency_identity(report: dict[str, Any]) -> tuple[str, str, str] | None:
     return cve, ecosystem, package_name
 
 
+def _manifest_path(report: dict[str, Any]) -> str:
+    metadata = report.get("dependency_metadata")
+    if not isinstance(metadata, dict):
+        return ""
+    return str(metadata.get("manifest_path") or "").strip()
+
+
+def _distinct_manifest_paths(candidate: dict[str, Any], report: dict[str, Any]) -> bool:
+    """Same CVE/package observed in two different manifests is two findings.
+
+    Only applies when both sides carry a manifest_path; a missing path keeps
+    the legacy CVE/package/ecosystem identity.
+    """
+    candidate_path = _manifest_path(candidate)
+    report_path = _manifest_path(report)
+    return bool(candidate_path and report_path and candidate_path != report_path)
+
+
 def _report_cve(report: dict[str, Any]) -> str:
     return str(report.get("cve") or "").strip().upper()
 
@@ -228,6 +246,8 @@ def _check_dependency_duplicate(
             report_cve, report_ecosystem, report_package_name = report_identity
             if (report_cve, report_package_name) != (cve, package_name):
                 continue
+            if _distinct_manifest_paths(candidate, report):
+                continue
             if report_ecosystem == ecosystem:
                 return {
                     "is_duplicate": True,

strix/report/sarif.py

@@ -531,6 +531,10 @@ def _result_properties(
         if value not in (None, ""):
             strix[key] = value
 
+    dependency_metadata = report.get("dependency_metadata")
+    if isinstance(dependency_metadata, dict) and dependency_metadata:
+        strix["dependency_metadata"] = dependency_metadata
+
     # SARIF is written for external upload (code-scanning / ASPM), so it must
     # NOT carry the weaponized exploit payload — that stays a local run
     # artifact (vulnerabilities.json / the finding MD). We surface the PoC

strix/report/writer.py

@@ -205,6 +205,8 @@ def render_vulnerability_md(report: dict[str, Any]) -> str:  # noqa: PLR0912, PL
         ("Ecosystem", dep_meta.get("package_ecosystem")),
         ("Installed Version", dep_meta.get("installed_version")),
         ("Fixed Version", dep_meta.get("fixed_version")),
+        ("Introduced By", dep_meta.get("introduced_by")),
+        ("Dependency Chain", dep_meta.get("dependency_path")),
         ("Endpoint", report.get("endpoint")),
         ("Method", report.get("method")),
         ("CVE", report.get("cve")),

strix/skills/custom/dependency_cve_scanning.md

@@ -28,7 +28,7 @@ Run from the repo root and store output in the shared artifact directory used by
 the source-aware pass:
 
 ```bash
-ART=/workspace/.strix-source-aware
+ART=/workspace/.source-aware
 mkdir -p "$ART"
 
 # Record the vuln DB age so a stale DB is a visible signal, not a silent clean scan.
@@ -39,9 +39,11 @@ trivy version --format json 2>/dev/null | tee "$ART/trivy-version.json"
 # sandbox with egress gets the freshest CVEs; if the update fails, fall back to the
 # cached DB instead of failing the scan. --offline-scan keeps per-package advisory
 # lookups offline.
-trivy fs --scanners vuln --timeout 30m --offline-scan \
+# --list-all-pkgs includes the package graph (Relationship + DependsOn) needed
+# to attribute transitive CVEs to the direct dependency that introduces them.
+trivy fs --scanners vuln --timeout 30m --offline-scan --list-all-pkgs \
   --format json --output "$ART/trivy-sca.json" . \
-  || trivy fs --scanners vuln --timeout 30m --offline-scan --skip-db-update \
+  || trivy fs --scanners vuln --timeout 30m --offline-scan --skip-db-update --list-all-pkgs \
        --format json --output "$ART/trivy-sca.json" . \
   || true
 ```
@@ -75,18 +77,111 @@ For each entry under `.Results[].Vulnerabilities[]` in `trivy-sca.json`, collect
 - `CVSS` — the published advisory base score
 - `PrimaryURL` / references — to verify the advisory
 
-Deduplicate by `(CVE, PkgName, InstalledVersion)`. File one
-`create_dependency_report` per CVE — do not batch multiple CVEs into one report.
+Deduplicate by `(CVE, PkgName, Target)` — the same CVE/package observed in two
+different manifests (e.g. two workspaces of a monorepo) is two findings, one
+per manifest. File one `create_dependency_report` per CVE — do not batch
+multiple CVEs into one report.
+
+### Attribute transitive CVEs to the direct dependency
+
+With `--list-all-pkgs`, each `.Results[].Packages[]` entry carries `ID`
+(`name@version`), `Relationship` (`direct` / `indirect`) and `DependsOn` (the
+`ID`s it resolves to). For every vulnerable package that is **indirect**, walk
+the `DependsOn` graph backwards to find the `direct` package(s) whose closure
+contains it, then pass to `create_dependency_report`:
+
+- `introduced_by` — the direct dependency as `name@version` (e.g.
+  `express@4.18.1`). If several direct dependencies pull it in, pick the
+  primary one and name the rest in `technical_analysis`.
+- `dependency_path` — the shortest resolution chain from that direct
+  dependency to the vulnerable package, joined with ` > ` (e.g.
+  `express@4.18.1 > body-parser@1.20.0 > qs@6.10.2`).
+- Omit both when the vulnerable package is itself a direct dependency.
+
+If the ecosystem's lockfile gives trivy no graph (`DependsOn` absent), derive
+the chain from the package manager instead (`npm ls <pkg>`, `pnpm why <pkg>`,
+`yarn why <pkg>`, `pipdeptree --reverse -p <pkg>`, `go mod graph`,
+`mvn dependency:tree`, ...) — and if that also fails, leave the fields out
+rather than guessing.
+
+For transitive findings, `remediation_steps` must be actionable at the
+**direct-dependency level**: upgrading the vulnerable package directly is
+usually impossible from the app's own manifest. Say which direct dependency to
+bump (a version whose closure resolves the fixed version), or how to force the
+resolution (npm `overrides` / yarn `resolutions` / pnpm `pnpm.overrides` /
+Maven `dependencyManagement` / Gradle resolution strategy / `go mod edit`),
+not just "upgrade <vulnerable pkg> to <fixed>".
+
+### Usage / reachability analysis (required for every dependency CVE)
+
+For every CVE you are about to report, run a static usage analysis and record
+the result in the structured `reachability` + `reachability_evidence` fields.
+The level is an **evidence ladder, never an exploitability verdict** — claim
+only what you proved, and cite the proof. It never changes severity (that is
+`advisory_cvss` alone); it exists so the reader can prioritize.
+
+**Go — use govulncheck (real call-graph analysis):**
+
+```bash
+# Symbol-level: reports only vulnerabilities whose vulnerable functions are
+# actually reachable from application code. Needs the Go toolchain + module
+# deps; if either is missing, fall back to the checks below rather than
+# claiming a level.
+if command -v govulncheck >/dev/null && go version >/dev/null 2>&1; then
+  govulncheck -format json ./... > "$ART/govulncheck.json" || true
+fi
+```
+
+- A finding with a call stack ⇒ `reachability=reachable_call_path`, put the
+  call-path excerpt (entrypoint → vulnerable function) in
+  `reachability_evidence`.
+- Listed as affecting a required module but with no reachable symbol ⇒ fall
+  back to the import/symbol checks below (`imported` / `not_imported`).
+
+**All other ecosystems — import check, then symbol match:**
+
+1. **Import check.** Search application code (exclude lockfiles, vendored
+   deps, `node_modules`, build output) for imports of the vulnerable package:
+   `ast-grep`/`rg` for `import`/`require`/`from X import` of the package (and
+   its ecosystem import name, which may differ from the registry name, e.g.
+   `PyYAML` → `yaml`). No hits ⇒ `not_imported`, with the search scope stated
+   in `reachability_evidence`. For a **transitive** dependency, the check is
+   whether application code imports it directly; if not, it is reachable only
+   through the direct dependency — check whether the direct dep's usage can
+   hit it (if unclear, use `imported` when the direct dep is used at all).
+2. **Symbol match.** Read the advisory (GHSA/NVD/OSV `affected[].ecosystem_specific.imports` or the
+   advisory text) for the affected functions/classes/APIs. Search application
+   code for those symbols (`ast-grep` pattern or `rg -n`). Hits ⇒
+   `vulnerable_symbol_used`, with repo-relative `file:line` of each hit (up
+   to a handful) in `reachability_evidence`. Imported but no affected-symbol
+   usage found (or the advisory names no symbols) ⇒ `imported`.
+3. If the analysis was not performed or is inconclusive (obfuscated code,
+   dynamic loading, unparsable sources) ⇒ `unknown` and say why in
+   `assumptions`.
+
+Cheap-first budgeting: the import check is one search per package — always do
+it. Do the symbol match at least for every `critical`/`high`/KEV CVE; batch
+the searches. Never let this analysis stall reporting — `unknown` with a
+reason beats an unverified claim.
+
+Anti-overclaim rules:
+
+- `not_imported` still does NOT mean safe (dynamic `import()`/reflection/
+  framework wiring evade static search) — never phrase it as "not exploitable".
+- `reachable_call_path` is reserved for call-graph tools (govulncheck); a
+  symbol grep hit is `vulnerable_symbol_used`, no matter how convinced you are.
+- The tool rejects any level other than `unknown` without
+  `reachability_evidence`.
 
 ### Reachability is a confidence modifier, not a gate
 
 Do NOT suppress or downgrade a known CVE just because you could not prove the
 vulnerable code path is reachable. Report it, set `advisory_cvss` from the
-advisory, and use `assumptions` to note reachability (e.g. "the vulnerable
-`template()` API does not appear to be imported in application code, so practical
-exploitability is uncertain"). If you *can* show reachability or chain it into a
-dynamic exploit, do that and report it as a normal dynamic finding with
-`create_vulnerability_report` instead.
+advisory, record the usage analysis in `reachability`/`reachability_evidence`,
+and use `assumptions` for anything softer. If you *can* actually trigger the
+vulnerable path or chain it into a dynamic exploit, additionally report that
+as a normal dynamic finding with `create_vulnerability_report` (the standalone
+CVE stays in its own `create_dependency_report`).
 
 ## Reporting
 
@@ -107,6 +202,12 @@ findings and rejects empty PoC fields):
   - `package_ecosystem` — normalized ecosystem from `.Results[].Type` (lowercased,
     e.g. `npm`, `pypi`, `go`, `maven`, `rubygems`, `cargo`) (required).
   - `fixed_version` — `FixedVersion` (leave empty only if no fix is published).
+  - `manifest_path` — the repo-relative `Target` lockfile/manifest path
+    (required). Strip any scan-workspace or repo checkout directory prefix so
+    the path is relative to the repository root (e.g. `package-lock.json`,
+    `services/api/pom.xml`); the tool rejects absolute paths and `..` segments.
+    This binds the finding to the exact file so remediation can target the
+    right repository.
 - Reference the repo-relative `Target` lockfile path in `description` /
   `technical_analysis` (no leading slash) so the finding is traceable.
 - Put the concrete proof in `description` / `technical_analysis`: package name,
@@ -120,7 +221,8 @@ findings and rejects empty PoC fields):
 - Set `cwe` to the most specific `CWE-NNN` when the advisory names one.
 - Do NOT cap severity at LOW just because there is no dynamic reproduction — use
   the advisory score.
-- Use `assumptions` for reachability/exploitability caveats.
+- Set `reachability` + `reachability_evidence` from the usage analysis above;
+  use `assumptions` for anything softer (confidence, caveats, analysis limits).
 
 Verify the CVE with `web_search` when available before reporting. Never guess or
 hallucinate a CVE id.
@@ -136,3 +238,5 @@ hallucinate a CVE id.
 - Do not silently drop a known CVE because it lacks a dynamic PoC — that is the
   exact failure this skill prevents.
 - Do not downgrade advisory severity for lack of dynamic reproduction.
+- Do not claim a `reachability` level the evidence does not prove — `unknown`
+  with a reason is always acceptable; an overclaimed level never is.

strix/skills/custom/source_aware_sast.md

@@ -12,7 +12,7 @@ Use this skill for source-heavy analysis where static and structural signals sho
 Run tools from repo root and store outputs in a dedicated artifact directory:
 
 ```bash
-mkdir -p /workspace/.strix-source-aware
+mkdir -p /workspace/.source-aware
 ```
 
 ## Baseline Coverage Bundle (Recommended)
@@ -20,7 +20,7 @@ mkdir -p /workspace/.strix-source-aware
 Run this baseline once per repository before deep narrowing:
 
 ```bash
-ART=/workspace/.strix-source-aware
+ART=/workspace/.source-aware
 mkdir -p "$ART"
 
 semgrep scan --config p/default --config p/golang --config p/secrets \
@@ -30,7 +30,7 @@ python3 - <<'PY'
 import json
 from pathlib import Path
 
-art = Path("/workspace/.strix-source-aware")
+art = Path("/workspace/.source-aware")
 semgrep_json = art / "semgrep.json"
 targets_file = art / "sg-targets.txt"
 
@@ -70,10 +70,10 @@ Use Semgrep as the default static triage pass:
 ```bash
 # Preferred deterministic profile set (works with --metrics=off)
 semgrep scan --config p/default --config p/golang --config p/secrets \
-  --metrics=off --json --output /workspace/.strix-source-aware/semgrep.json .
+  --metrics=off --json --output /workspace/.source-aware/semgrep.json .
 
 # If you choose auto config, do not combine it with --metrics=off
-semgrep scan --config auto --json --output /workspace/.strix-source-aware/semgrep-auto.json .
+semgrep scan --config auto --json --output /workspace/.source-aware/semgrep-auto.json .
 ```
 
 If diff scope is active, restrict to changed files first, then expand only when needed.
@@ -85,8 +85,8 @@ Use `sg` for structure-aware code hunting:
 ```bash
 # Ruleless structural pass over deterministic target list (no sgconfig.yml required)
 xargs -r -n 200 sg run --pattern '$F($$$ARGS)' --json=stream \
-  < /workspace/.strix-source-aware/sg-targets.txt \
-  > /workspace/.strix-source-aware/ast-grep.json 2> /workspace/.strix-source-aware/ast-grep.log || true
+  < /workspace/.source-aware/sg-targets.txt \
+  > /workspace/.source-aware/ast-grep.json 2> /workspace/.source-aware/ast-grep.log || true
 ```
 
 Target high-value patterns such as:
@@ -110,15 +110,15 @@ Use outputs to improve route/symbol/sink maps for subsequent targeted scans.
 Detect hardcoded credentials:
 
 ```bash
-gitleaks detect --source . --report-format json --report-path /workspace/.strix-source-aware/gitleaks.json
-trufflehog filesystem --json . > /workspace/.strix-source-aware/trufflehog.json
+gitleaks detect --source . --report-format json --report-path /workspace/.source-aware/gitleaks.json
+trufflehog filesystem --json . > /workspace/.source-aware/trufflehog.json
 ```
 
 Run repository-wide dependency and config checks:
 
 ```bash
 trivy fs --scanners vuln,misconfig --timeout 30m --offline-scan \
-  --format json --output /workspace/.strix-source-aware/trivy-fs.json . || true
+  --format json --output /workspace/.source-aware/trivy-fs.json . || true
 ```
 
 Known-CVE dependency findings are the one exception to the "report only after
@@ -132,9 +132,9 @@ For frontends and Node services, layer these on top of the language-agnostic
 passes above:
 
 ```bash
-retire --path . --outputformat json --outputpath /workspace/.strix-source-aware/retire.json || true
+retire --path . --outputformat json --outputpath /workspace/.source-aware/retire.json || true
 eslint --no-config-lookup --rule '{"no-eval":2,"no-implied-eval":2}' \
-  -f json -o /workspace/.strix-source-aware/eslint.json . || true
+  -f json -o /workspace/.source-aware/eslint.json . || true
 ```
 
 When you hit a minified bundle, run `js-beautify <file>` for a readable

strix/skills/technologies/active_directory.md

@@ -202,7 +202,7 @@ Confirm with a version/patch check before firing — these are destructive.
 
 ## Tooling
 
-**None of the AD tools below ship in the Strix sandbox by default** (the image is Kali-rolling but installs only web-focused tooling). Install what the task needs — the sandbox has `pipx`, `pip`, `go`, `git`, and Kali's apt repos. AD testing also requires **network reachability to the target DC/subnet**, which the default web-target sandbox usually lacks; confirm connectivity first.
+**None of the AD tools below ship in the sandbox by default** (the image is Kali-rolling but installs only web-focused tooling). Install what the task needs — the sandbox has `pipx`, `pip`, `go`, `git`, and Kali's apt repos. AD testing also requires **network reachability to the target DC/subnet**, which the default web-target sandbox usually lacks; confirm connectivity first.
 
 ```
 # Python identity toolkit (impacket = GetUserSPNs/GetNPUsers/secretsdump/ntlmrelayx/getST/addcomputer/rbcd)

strix/skills/tooling/python.md

@@ -5,7 +5,7 @@ description: Run Python through exec_command in the SDK sandbox. Use the image-b
 
 # Python In The Sandbox
 
-Use `exec_command` for Python. There is no separate Strix Python executor.
+Use `exec_command` for Python. There is no separate Python executor.
 
 Prefer writing reusable scripts to a `.py` file and running them with
 `python3 <name>.py`. For short one-off transformations, `python3 -c` or a

strix/skills/vulnerabilities/prototype_pollution.md

@@ -80,7 +80,7 @@ Gadget availability depends on package versions — enumerate `node_modules` in
 1. **Identify merge points** — Search for extend/merge/defaults/deep copy on user-controlled objects
 2. **Baseline probe** — Inject benign pollution marker:
    ```json
-   {"__proto__": {"strixPolluted": "yes"}}
+   {"__proto__": {"pollutionCanary": "yes"}}
    ```
    Verify via response behavior, error messages, or follow-up request reading shared state
 3. **Shape variants** — Test `__proto__`, `constructor.prototype`, nested bracket notation
@@ -121,7 +121,7 @@ Gadget availability depends on package versions — enumerate `node_modules` in
 
 ## Pro Tips
 
-1. Always verify pollution with a unique canary key (`strixPolluted_<random>`) before attempting RCE gadgets
+1. Always verify pollution with a unique canary key (`pollutionCanary_<random>`) before attempting RCE gadgets
 2. In white-box scans, grep for `merge`, `extend`, `defaultsDeep`, `assign` with user input
 3. Check both request parsing and response template config merges (second-order)
 4. Node gadget chains are version-specific — confirm package version before claiming RCE

strix/tools/agents_graph/tools.py

@@ -14,6 +14,7 @@ from agents import RunContextWrapper, function_tool
 
 from strix.core.agents import Status, coordinator_from_context
 from strix.core.execution import notify_parent_on_terminal
+from strix.core.hooks import LLM_TURN_KEY
 from strix.skills import validate_requested_skills
 
 
@@ -224,6 +225,7 @@ _WAIT_DEFAULT_TIMEOUT_S = 300
 # ``timeout_seconds`` the model asks for. One second of headroom lets the
 # tool's own timeout fire first and return a clean result.
 _WAIT_HARD_CEILING_S = _WAIT_DEFAULT_TIMEOUT_S + 1
+_WAITED_TURN_KEY = "waited_llm_turn"
 
 
 @function_tool(timeout=_WAIT_HARD_CEILING_S)
@@ -239,6 +241,11 @@ async def wait_for_agents(  # noqa: PLR0911
     completion reports. You resume the instant any message arrives, so
     size ``timeout_seconds`` to the work you're awaiting.
 
+    **Issue exactly one wait, then stop and react to what it returns.**
+    This call blocks and resumes on its own; it is not a poll you repeat.
+    Do not write out a wait/check loop ahead of time — a second wait in
+    the same turn returns immediately without waiting.
+
     **This tool is only for waiting on other agents.** Two things it is
     NOT for:
 
@@ -290,6 +297,24 @@ async def wait_for_agents(  # noqa: PLR0911
             default=str,
         )
 
+    turn = inner.get(LLM_TURN_KEY)
+    if turn is not None and inner.get(_WAITED_TURN_KEY) == turn:
+        return json.dumps(
+            {
+                "success": True,
+                "wait_outcome": "already_waited",
+                "reason": reason,
+                "note": (
+                    "You already waited in this turn. A single wait_for_agents blocks and "
+                    "resumes on its own, so queueing more waits only strands you — issue one "
+                    "wait, then react to what it returns."
+                ),
+            },
+            ensure_ascii=False,
+            default=str,
+        )
+    inner[_WAITED_TURN_KEY] = turn
+
     async with coordinator._lock:
         stopped = coordinator.statuses.get(me) == "stopped"
     if stopped:

strix/tools/output_store.py

@@ -1,7 +1,7 @@
 """Bound oversized tool results before they enter agent history.
 
 Oversized results are spilled into the sandbox at
-``/workspace/.strix/tool-output/<id>.txt``; the agent sees a head + tail slice
+``/workspace/.tool-output/<id>.txt``; the agent sees a head + tail slice
 plus the path and reads the rest back with its own file tools. The spill writer
 is injected by the runner via :func:`configure_spill_writer`.
 """
@@ -25,7 +25,7 @@ _WORKSPACE_SPILL_NOTICE = (
     "in the sandbox; read it with exec_command (e.g. `sed -n`, `grep`, `cat`) ...]"
 )
 
-WORKSPACE_SPILL_DIR = "/workspace/.strix/tool-output"
+WORKSPACE_SPILL_DIR = "/workspace/.tool-output"
 
 # Longest possible workspace path, used only to reserve notice bytes.
 _SAMPLE_WORKSPACE_PATH = f"{WORKSPACE_SPILL_DIR}/{'0' * 32}.txt"

strix/tools/proxy/caido_api.py

@@ -189,7 +189,11 @@ def build_raw_request(
 
     final_headers = {**headers}
     final_headers.setdefault("Host", parsed.netloc)
-    final_headers.setdefault("User-Agent", "strix")
+    final_headers.setdefault(
+        "User-Agent",
+        "Mozilla/5.0 (X11; Linux x86_64) AppleWebKit/537.36 "
+        "(KHTML, like Gecko) Chrome/125.0.0.0 Safari/537.36",
+    )
     # Framing headers inherited from the captured request describe the ORIGINAL
     # body; once the body is modified for replay they are stale. We always send a
     # plain (non-chunked) body with an explicit Content-Length, so drop any

strix/tools/reporting/tool.py

@@ -719,12 +719,47 @@ def _dependency_severity(advisory_cvss: float | None) -> tuple[float, str]:
     return score, "none"
 
 
+_VALID_REACHABILITY = frozenset(
+    {
+        "not_imported",
+        "imported",
+        "vulnerable_symbol_used",
+        "reachable_call_path",
+        "unknown",
+    }
+)
+
+
+def _validate_manifest_path(manifest_path: str | None) -> str | None:
+    """Return an error message when manifest_path is missing or unsafe."""
+    path = (manifest_path or "").strip()
+    if not path:
+        return (
+            "manifest_path is required: pass the repo-relative path of the "
+            "lockfile/manifest where the vulnerable version was observed "
+            "(trivy's Target, e.g. 'package-lock.json' or "
+            "'services/api/pom.xml'). It binds the finding to its exact file "
+            "so remediation can target the right repository."
+        )
+    if path.startswith("/") or "\\" in path or path.split("/")[0].endswith(":"):
+        return f"manifest_path must be a relative path within the repository, got {path!r}"
+    segments = path.split("/")
+    if any(segment in ("", ".", "..") for segment in segments):
+        return f"manifest_path must not contain empty, '.', or '..' segments, got {path!r}"
+    return None
+
+
 def _build_dependency_metadata(
     *,
     package_name: str,
     installed_version: str,
     package_ecosystem: str | None,
     fixed_version: str | None,
+    introduced_by: str | None,
+    dependency_path: str | None,
+    manifest_path: str | None = None,
+    reachability: str | None = None,
+    reachability_evidence: str | None = None,
 ) -> dict[str, str]:
     metadata = {
         "package_name": package_name.strip(),
@@ -732,17 +767,43 @@ def _build_dependency_metadata(
     }
     if package_ecosystem and package_ecosystem.strip():
         metadata["package_ecosystem"] = package_ecosystem.strip()
+    if manifest_path and manifest_path.strip():
+        metadata["manifest_path"] = manifest_path.strip()
     if fixed_version and fixed_version.strip():
         metadata["fixed_version"] = fixed_version.strip()
+    if introduced_by and introduced_by.strip():
+        metadata["introduced_by"] = introduced_by.strip()
+    if dependency_path and dependency_path.strip():
+        metadata["dependency_path"] = dependency_path.strip()
+    # "unknown" is the absent case — omitting it keeps the jsonb contract clean,
+    # and evidence without a level would have nothing to qualify.
+    if reachability and reachability.strip() and reachability.strip() != "unknown":
+        metadata["reachability"] = reachability.strip()
+        if reachability_evidence and reachability_evidence.strip():
+            metadata["reachability_evidence"] = reachability_evidence.strip()
     return metadata
 
 
+_REACHABILITY_EVIDENCE_LABELS = {
+    "not_imported": "not imported by application code",
+    "imported": "imported by application code; affected API usage unconfirmed",
+    "vulnerable_symbol_used": "the advisory's affected API is used in application code",
+    "reachable_call_path": (
+        "a call path from application code to the vulnerable function was proven"
+    ),
+}
+
+
 def _build_dependency_evidence(
     *,
     cve: str,
     package_name: str,
     installed_version: str,
     fixed_version: str | None,
+    introduced_by: str | None,
+    dependency_path: str | None,
+    reachability: str | None = None,
+    reachability_evidence: str | None = None,
 ) -> str:
     evidence = (
         f"**Advisory evidence:** `{cve}` applies to `{package_name}` "
@@ -750,6 +811,22 @@ def _build_dependency_evidence(
     )
     if fixed_version and fixed_version.strip():
         evidence += f" The advisory is fixed in `{fixed_version.strip()}`."
+    if introduced_by and introduced_by.strip():
+        evidence += (
+            f"\n\n**Transitive dependency:** introduced by the direct "
+            f"dependency `{introduced_by.strip()}`."
+        )
+    if dependency_path and dependency_path.strip():
+        evidence += f"\n\n**Dependency chain:** `{dependency_path.strip()}`"
+    label = _REACHABILITY_EVIDENCE_LABELS.get((reachability or "").strip().lower())
+    if label:
+        evidence += f"\n\n**Usage analysis:** {label}."
+        if reachability_evidence and reachability_evidence.strip():
+            evidence += f" {reachability_evidence.strip()}"
+        evidence += (
+            " This is a prioritization signal from static analysis, not a"
+            " proof of exploitability or of safety."
+        )
     return evidence
 
 
@@ -770,6 +847,11 @@ async def _do_create_dependency(  # noqa: PLR0912
     advisory_cvss: float | None,
     technical_analysis: str | None,
     fix_effort: str,
+    introduced_by: str | None = None,
+    dependency_path: str | None = None,
+    manifest_path: str | None = None,
+    reachability: str = "unknown",
+    reachability_evidence: str | None = None,
     agent_id: str | None = None,
     agent_name: str | None = None,
 ) -> dict[str, Any]:
@@ -806,6 +888,22 @@ async def _do_create_dependency(  # noqa: PLR0912
             f"Invalid fix_effort: {fix_effort!r}. Must be one of: {sorted(_VALID_FIX_EFFORT)}"
         )
 
+    manifest_err = _validate_manifest_path(manifest_path)
+    if manifest_err:
+        errors.append(manifest_err)
+
+    reachability = (reachability or "unknown").strip().lower()
+    if reachability not in _VALID_REACHABILITY:
+        errors.append(
+            f"Invalid reachability: {reachability!r}. Must be one of: {sorted(_VALID_REACHABILITY)}"
+        )
+    elif reachability != "unknown" and not (reachability_evidence or "").strip():
+        errors.append(
+            "reachability_evidence is required when reachability is not 'unknown': "
+            "cite the concrete proof (import file:line, matched symbol usage, or "
+            "govulncheck call path). Never claim a reachability level without evidence."
+        )
+
     if advisory_cvss is None:
         errors.append(
             "advisory_cvss is required: read the published advisory base score "
@@ -824,12 +922,21 @@ async def _do_create_dependency(  # noqa: PLR0912
         installed_version=installed_version,
         package_ecosystem=package_ecosystem,
         fixed_version=fixed_version,
+        introduced_by=introduced_by,
+        dependency_path=dependency_path,
+        manifest_path=manifest_path,
+        reachability=reachability,
+        reachability_evidence=reachability_evidence,
     )
     evidence = _build_dependency_evidence(
         cve=parsed_cve,
         package_name=package_name.strip(),
         installed_version=installed_version.strip(),
         fixed_version=fixed_version,
+        introduced_by=introduced_by,
+        dependency_path=dependency_path,
+        reachability=reachability,
+        reachability_evidence=reachability_evidence,
     )
 
     try:
@@ -922,10 +1029,15 @@ async def create_dependency_report(
     remediation_steps: str,
     assumptions: str,
     package_ecosystem: str,
+    manifest_path: str | None = None,
     fixed_version: str | None = None,
     cwe: str | None = None,
     technical_analysis: str | None = None,
     fix_effort: str = "low",
+    introduced_by: str | None = None,
+    dependency_path: str | None = None,
+    reachability: str = "unknown",
+    reachability_evidence: str | None = None,
 ) -> str:
     """File a known-CVE dependency (SCA) finding — one report per CVE x package.
 
@@ -950,9 +1062,26 @@ async def create_dependency_report(
     - Re-reporting the same CVE/package already filed.
 
     **Reachability**: do NOT silently downgrade or suppress a finding
-    because the vulnerable code path may be unreachable — instead state
-    reachability as an ``assumptions`` / confidence factor. Report the
-    finding; let the reader weigh exploitability.
+    because the vulnerable code path may be unreachable — report it, and
+    record what the usage analysis showed via the structured
+    ``reachability`` + ``reachability_evidence`` fields (see the
+    dependency-cve-scanning skill for the analysis procedure). The level
+    is an evidence ladder, never an exploitability verdict:
+
+    - ``not_imported`` — the package is never imported/required by
+      application code (strongest de-prioritization signal; still not
+      proof of safety — dynamic loading, reflection, or framework wiring
+      can evade static search).
+    - ``imported`` — application code imports the package, but usage of
+      the advisory's affected API was not confirmed.
+    - ``vulnerable_symbol_used`` — the advisory's affected
+      function/class/API appears in application code.
+    - ``reachable_call_path`` — a call-graph tool (e.g. ``govulncheck``)
+      proved a path from application code to the vulnerable function.
+    - ``unknown`` — usage analysis was not performed or was inconclusive.
+
+    Severity is still derived solely from ``advisory_cvss`` — the
+    reachability level never changes the rating, only prioritization.
 
     **Formatting**: use markdown in text fields (``**bold**``, ``inline
     code`` for package/version identifiers, fenced code blocks for
@@ -978,6 +1107,30 @@ async def create_dependency_report(
         technical_analysis: Optional deeper mechanism/root-cause detail.
         fix_effort: One of ``trivial`` / ``low`` / ``medium`` / ``high``
             (dependency upgrades are usually ``trivial``/``low``).
+        introduced_by: For a **transitive** dependency, the direct
+            dependency (from the project's own manifest) that pulls the
+            vulnerable package in, as ``name@version`` (e.g.
+            ``express@4.18.1``). Omit when the vulnerable package is
+            itself a direct dependency.
+        dependency_path: The resolution chain from the direct dependency
+            to the vulnerable package, joined with `` > `` (e.g.
+            ``express@4.18.1 > body-parser@1.20.0 > qs@6.10.2``). Omit
+            for direct dependencies.
+        manifest_path: **Required.** The repo-relative path of the
+            lockfile/manifest where the vulnerable version was observed —
+            trivy's ``Target`` (e.g. ``package-lock.json``,
+            ``services/api/pom.xml``). Strip any scan-workspace or repo
+            checkout directory prefix so the path is relative to the
+            repository root. This binds the finding to its exact file so
+            remediation can target the right repository.
+        reachability: Usage-evidence level from static analysis — one of
+            ``not_imported`` / ``imported`` / ``vulnerable_symbol_used`` /
+            ``reachable_call_path`` / ``unknown``. Claim only what the
+            evidence proves; when in doubt use ``unknown``.
+        reachability_evidence: The concrete proof for the claimed level
+            (required for any level other than ``unknown``): repo-relative
+            ``file:line`` of the import or symbol usage, the matched
+            advisory symbols, or the govulncheck call-path excerpt.
     """
     agent_id, agent_name = _caller_identity(ctx)
 
@@ -997,6 +1150,11 @@ async def create_dependency_report(
         advisory_cvss=advisory_cvss,
         technical_analysis=technical_analysis,
         fix_effort=fix_effort,
+        introduced_by=introduced_by,
+        dependency_path=dependency_path,
+        manifest_path=manifest_path,
+        reachability=reachability,
+        reachability_evidence=reachability_evidence,
         agent_id=agent_id,
         agent_name=agent_name,
     )

tests/test_disable_streaming.py

@@ -31,7 +31,7 @@ from openai.types.responses import (
 
 from strix.config import codex, loader
 from strix.config.loader import load_settings
-from strix.config.models import StrixProvider, _NonStreamingModel
+from strix.config.models import StrixProvider, _NonStreamingModel, _TurnGuardModel
 
 
 if TYPE_CHECKING:
@@ -299,10 +299,11 @@ def test_get_model_wraps_when_disabled(
     load_settings()
 
     model = StrixProvider().get_model("openai/gpt-4o-mini")
-    assert isinstance(model, _NonStreamingModel)
+    assert isinstance(model, _TurnGuardModel)
+    assert isinstance(model._inner, _NonStreamingModel)
 
 
-def test_get_model_unwrapped_by_default(
+def test_get_model_keeps_streaming_by_default(
     monkeypatch: pytest.MonkeyPatch, _reset_settings: None
 ) -> None:
     inner = _DummyModel()
@@ -310,17 +311,20 @@ def test_get_model_unwrapped_by_default(
     load_settings()
 
     model = StrixProvider().get_model("openai/gpt-4o-mini")
-    assert model is inner
+    assert isinstance(model, _TurnGuardModel)
+    assert model._inner is inner
 
 
-def test_get_model_does_not_wrap_subscription_model(
+def test_get_model_guards_subscription_model_but_keeps_it_streaming(
     monkeypatch: pytest.MonkeyPatch, _reset_settings: None
 ) -> None:
-    # Subscription (ChatGPT) models are always streamed and must not be wrapped.
+    # Subscription (ChatGPT) models are always streamed, so LLM_DISABLE_STREAMING
+    # must not apply — but a runaway response needs capping there too.
     monkeypatch.setattr(codex, "subscription_model", lambda *_: "gpt-5.5")
     monkeypatch.setattr(codex, "get_subscription_client", lambda: AsyncOpenAI(api_key="x"))
     monkeypatch.setenv("LLM_DISABLE_STREAMING", "true")
     load_settings()
 
     model = StrixProvider().get_model("gpt-5.5")
-    assert not isinstance(model, _NonStreamingModel)
+    assert isinstance(model, _TurnGuardModel)
+    assert not isinstance(model._inner, _NonStreamingModel)

tests/test_reporting_fields.py

@@ -141,6 +141,7 @@ async def test_dependency_report_sets_class_and_metadata(report_state: ReportSta
         remediation_steps="Upgrade to 4.17.21.",
         assumptions="Assumes the template sink is reachable.",
         package_ecosystem="npm",
+        manifest_path="package-lock.json",
         fixed_version="4.17.21",
         cwe="CWE-94",
         advisory_cvss=7.2,
@@ -160,10 +161,76 @@ async def test_dependency_report_sets_class_and_metadata(report_state: ReportSta
         "package_name": "lodash",
         "installed_version": "4.17.20",
         "package_ecosystem": "npm",
+        "manifest_path": "package-lock.json",
         "fixed_version": "4.17.21",
     }
 
 
+async def test_dependency_report_records_transitive_chain(report_state: ReportState) -> None:
+    result = await _do_create_dependency(
+        title="CVE-2022-24999 in qs 6.10.2",
+        description="Prototype pollution in qs parsing.",
+        target="repo/package.json",
+        cve="CVE-2022-24999",
+        package_name="qs",
+        installed_version="6.10.2",
+        impact="Denial of service via crafted query strings.",
+        remediation_steps="Upgrade express to 4.18.2, which resolves qs 6.11.0.",
+        assumptions="qs parses all incoming query strings by default.",
+        package_ecosystem="npm",
+        manifest_path="package-lock.json",
+        fixed_version="6.10.3",
+        cwe="CWE-1321",
+        advisory_cvss=7.5,
+        technical_analysis=None,
+        fix_effort="trivial",
+        introduced_by="express@4.18.1",
+        dependency_path="express@4.18.1 > body-parser@1.20.0 > qs@6.10.2",
+    )
+    assert result["success"] is True
+    report = report_state.vulnerability_reports[0]
+    assert report["dependency_metadata"]["introduced_by"] == "express@4.18.1"
+    assert (
+        report["dependency_metadata"]["dependency_path"]
+        == "express@4.18.1 > body-parser@1.20.0 > qs@6.10.2"
+    )
+    assert (
+        "**Transitive dependency:** introduced by the direct dependency `express@4.18.1`."
+        in report["evidence"]
+    )
+    assert (
+        "**Dependency chain:** `express@4.18.1 > body-parser@1.20.0 > qs@6.10.2`"
+        in report["evidence"]
+    )
+
+
+async def test_dependency_report_omits_blank_chain_fields(report_state: ReportState) -> None:
+    result = await _do_create_dependency(
+        title="CVE-2024-0001 in sample 1.0.0",
+        description="Published advisory affects the pinned version.",
+        target="repo/package.json",
+        cve="CVE-2024-0001",
+        package_name="sample",
+        installed_version="1.0.0",
+        impact="Impact.",
+        remediation_steps="Upgrade.",
+        assumptions="Assumptions.",
+        package_ecosystem="npm",
+        manifest_path="package-lock.json",
+        fixed_version=None,
+        cwe=None,
+        advisory_cvss=5.0,
+        technical_analysis=None,
+        fix_effort="trivial",
+        introduced_by="  ",
+        dependency_path=None,
+    )
+    assert result["success"] is True
+    report = report_state.vulnerability_reports[0]
+    assert "introduced_by" not in report["dependency_metadata"]
+    assert "dependency_path" not in report["dependency_metadata"]
+
+
 async def test_dependency_report_with_zero_cvss_remains_low_severity(
     report_state: ReportState,
 ) -> None:
@@ -178,6 +245,7 @@ async def test_dependency_report_with_zero_cvss_remains_low_severity(
         remediation_steps="Upgrade to 1.0.1.",
         assumptions="Assumes the package is included in deployed builds.",
         package_ecosystem="npm",
+        manifest_path="package-lock.json",
         fixed_version="1.0.1",
         cwe=None,
         advisory_cvss=0.0,
@@ -192,6 +260,124 @@ async def test_dependency_report_with_zero_cvss_remains_low_severity(
     assert report["cvss"] == 0.0
 
 
+async def test_dependency_report_records_reachability(report_state: ReportState) -> None:
+    result = await _do_create_dependency(
+        title="CVE-2021-23337 in lodash 4.17.20",
+        description="Command injection via template.",
+        target="repo/package.json",
+        cve="CVE-2021-23337",
+        package_name="lodash",
+        installed_version="4.17.20",
+        impact="Command injection where template is used.",
+        remediation_steps="Upgrade to 4.17.21.",
+        assumptions="Assumes the template sink is reachable.",
+        package_ecosystem="npm",
+        manifest_path="package-lock.json",
+        fixed_version="4.17.21",
+        cwe=None,
+        advisory_cvss=7.2,
+        technical_analysis=None,
+        fix_effort="low",
+        reachability="vulnerable_symbol_used",
+        reachability_evidence="src/render.ts:14 calls `_.template()`.",
+    )
+
+    assert result["success"] is True
+    report = report_state.vulnerability_reports[0]
+    assert report["dependency_metadata"]["reachability"] == "vulnerable_symbol_used"
+    assert (
+        report["dependency_metadata"]["reachability_evidence"]
+        == "src/render.ts:14 calls `_.template()`."
+    )
+    assert "**Usage analysis:**" in report["evidence"]
+    assert "not a proof of exploitability or of safety" in report["evidence"]
+    # The level must never influence the rating — that stays advisory_cvss only.
+    assert report["severity"] == "high"
+
+
+async def test_dependency_report_rejects_reachability_without_evidence(
+    report_state: ReportState,
+) -> None:
+    result = await _do_create_dependency(
+        title="CVE-2024-0001 in sample 1.0.0",
+        description="Published advisory affects the pinned version.",
+        target="repo/package.json",
+        cve="CVE-2024-0001",
+        package_name="sample",
+        installed_version="1.0.0",
+        impact="Impact.",
+        remediation_steps="Upgrade.",
+        assumptions="Assumptions.",
+        package_ecosystem="npm",
+        manifest_path="package-lock.json",
+        fixed_version="1.0.1",
+        cwe=None,
+        advisory_cvss=5.0,
+        technical_analysis=None,
+        fix_effort="low",
+        reachability="not_imported",
+    )
+
+    assert result["success"] is False
+    assert any("reachability_evidence is required" in e for e in result["errors"])
+    assert not report_state.vulnerability_reports
+
+
+async def test_dependency_report_rejects_unknown_reachability_level(
+    report_state: ReportState,
+) -> None:
+    result = await _do_create_dependency(
+        title="CVE-2024-0001 in sample 1.0.0",
+        description="Published advisory affects the pinned version.",
+        target="repo/package.json",
+        cve="CVE-2024-0001",
+        package_name="sample",
+        installed_version="1.0.0",
+        impact="Impact.",
+        remediation_steps="Upgrade.",
+        assumptions="Assumptions.",
+        package_ecosystem="npm",
+        manifest_path="package-lock.json",
+        fixed_version="1.0.1",
+        cwe=None,
+        advisory_cvss=5.0,
+        technical_analysis=None,
+        fix_effort="low",
+        reachability="not_exploitable",
+        reachability_evidence="vibes",
+    )
+
+    assert result["success"] is False
+    assert any("Invalid reachability" in e for e in result["errors"])
+    assert not report_state.vulnerability_reports
+
+
+async def test_dependency_report_omits_unknown_reachability(report_state: ReportState) -> None:
+    result = await _do_create_dependency(
+        title="CVE-2024-0001 in sample 1.0.0",
+        description="Published advisory affects the pinned version.",
+        target="repo/package.json",
+        cve="CVE-2024-0001",
+        package_name="sample",
+        installed_version="1.0.0",
+        impact="Impact.",
+        remediation_steps="Upgrade.",
+        assumptions="Analysis was inconclusive.",
+        package_ecosystem="npm",
+        manifest_path="package-lock.json",
+        fixed_version="1.0.1",
+        cwe=None,
+        advisory_cvss=5.0,
+        technical_analysis=None,
+        fix_effort="low",
+    )
+
+    assert result["success"] is True
+    metadata = report_state.vulnerability_reports[0]["dependency_metadata"]
+    assert "reachability" not in metadata
+    assert "reachability_evidence" not in metadata
+
+
 async def test_dependency_report_requires_advisory_cvss(report_state: ReportState) -> None:
     result = await _do_create_dependency(
         title="CVE-2024-0001 in sample 1.0.0",
@@ -204,6 +390,7 @@ async def test_dependency_report_requires_advisory_cvss(report_state: ReportStat
         remediation_steps="Upgrade to 1.0.1.",
         assumptions="Assumes the package ships in deployed builds.",
         package_ecosystem="npm",
+        manifest_path="package-lock.json",
         fixed_version="1.0.1",
         cwe=None,
         advisory_cvss=None,
@@ -259,6 +446,7 @@ async def test_dependency_report_dedupe_candidate_includes_dependency_metadata(
         remediation_steps="Upgrade to 1.0.1.",
         assumptions="Assumes the package is included in deployed builds.",
         package_ecosystem="npm",
+        manifest_path="package-lock.json",
         fixed_version="1.0.1",
         cwe=None,
         advisory_cvss=0.0,
@@ -276,6 +464,7 @@ async def test_dependency_report_dedupe_candidate_includes_dependency_metadata(
             "package_name": "sample",
             "installed_version": "1.0.0",
             "package_ecosystem": "npm",
+            "manifest_path": "package-lock.json",
             "fixed_version": "1.0.1",
         },
         "technical_analysis": None,
@@ -294,6 +483,7 @@ async def test_dependency_report_rejects_bad_cve(report_state: ReportState) -> N
         remediation_steps="r",
         assumptions="a",
         package_ecosystem="npm",
+        manifest_path="package-lock.json",
         fixed_version=None,
         cwe=None,
         advisory_cvss=None,
@@ -316,6 +506,7 @@ async def test_dependency_report_requires_ecosystem(report_state: ReportState) -
         remediation_steps="Upgrade to 1.0.1.",
         assumptions="Assumes the package is included in deployed builds.",
         package_ecosystem="",
+        manifest_path="package-lock.json",
         fixed_version="1.0.1",
         cwe=None,
         advisory_cvss=0.0,
@@ -328,6 +519,62 @@ async def test_dependency_report_requires_ecosystem(report_state: ReportState) -
     assert not report_state.vulnerability_reports
 
 
+async def test_dependency_report_requires_manifest_path(report_state: ReportState) -> None:
+    result = await _do_create_dependency(
+        title="CVE-2024-0001 in sample 1.0.0",
+        description="Published advisory affects the pinned version.",
+        target="repo/package.json",
+        cve="CVE-2024-0001",
+        package_name="sample",
+        installed_version="1.0.0",
+        impact="Low-impact dependency advisory.",
+        remediation_steps="Upgrade to 1.0.1.",
+        assumptions="Assumes the package is included in deployed builds.",
+        package_ecosystem="npm",
+        manifest_path=None,
+        fixed_version="1.0.1",
+        cwe=None,
+        advisory_cvss=5.0,
+        technical_analysis=None,
+        fix_effort="low",
+    )
+
+    assert result["success"] is False
+    assert any("manifest_path is required" in error for error in result["errors"])
+    assert not report_state.vulnerability_reports
+
+
+@pytest.mark.parametrize(
+    "bad_path",
+    ["/etc/passwd", "..\\pom.xml", "services/../pom.xml", "./package.json", "C:/repo/pom.xml"],
+)
+async def test_dependency_report_rejects_unsafe_manifest_path(
+    report_state: ReportState, bad_path: str
+) -> None:
+    result = await _do_create_dependency(
+        title="CVE-2024-0001 in sample 1.0.0",
+        description="Published advisory affects the pinned version.",
+        target="repo/package.json",
+        cve="CVE-2024-0001",
+        package_name="sample",
+        installed_version="1.0.0",
+        impact="Low-impact dependency advisory.",
+        remediation_steps="Upgrade to 1.0.1.",
+        assumptions="Assumes the package is included in deployed builds.",
+        package_ecosystem="npm",
+        manifest_path=bad_path,
+        fixed_version="1.0.1",
+        cwe=None,
+        advisory_cvss=5.0,
+        technical_analysis=None,
+        fix_effort="low",
+    )
+
+    assert result["success"] is False
+    assert any("manifest_path" in error for error in result["errors"])
+    assert not report_state.vulnerability_reports
+
+
 def test_dedupe_comparison_preserves_cve_identity() -> None:
     cleaned = _prepare_report_for_comparison(
         {
@@ -406,6 +653,72 @@ async def test_dependency_dedupe_rejects_same_cve_package_identity() -> None:
     assert result["confidence"] == 1.0
 
 
+async def test_dependency_dedupe_keeps_findings_from_distinct_manifests() -> None:
+    existing = [
+        {
+            "id": "vuln-0001",
+            "title": "CVE-2024-0001 in sample",
+            "cve": "CVE-2024-0001",
+            "dependency_metadata": {
+                "package_name": "sample",
+                "installed_version": "1.0.0",
+                "package_ecosystem": "npm",
+                "manifest_path": "services/api/package-lock.json",
+            },
+        }
+    ]
+    candidate = {
+        "title": "CVE-2024-0001 in sample (web)",
+        "description": "Same advisory observed in a second workspace.",
+        "target": "repo/package.json",
+        "cve": "CVE-2024-0001",
+        "dependency_metadata": {
+            "package_name": "sample",
+            "installed_version": "1.0.0",
+            "package_ecosystem": "npm",
+            "manifest_path": "services/web/package-lock.json",
+        },
+    }
+
+    result = await check_duplicate(candidate, existing)
+
+    assert result["is_duplicate"] is False
+    assert result["confidence"] == 1.0
+
+
+async def test_dependency_dedupe_rejects_same_manifest_identity() -> None:
+    existing = [
+        {
+            "id": "vuln-0001",
+            "title": "CVE-2024-0001 in sample",
+            "cve": "CVE-2024-0001",
+            "dependency_metadata": {
+                "package_name": "sample",
+                "installed_version": "1.0.0",
+                "package_ecosystem": "npm",
+                "manifest_path": "services/api/package-lock.json",
+            },
+        }
+    ]
+    candidate = {
+        "title": "CVE-2024-0001 in sample re-reported",
+        "description": "Same advisory, same manifest.",
+        "target": "repo/package.json",
+        "cve": "CVE-2024-0001",
+        "dependency_metadata": {
+            "package_name": "sample",
+            "installed_version": "1.0.0",
+            "package_ecosystem": "npm",
+            "manifest_path": "services/api/package-lock.json",
+        },
+    }
+
+    result = await check_duplicate(candidate, existing)
+
+    assert result["is_duplicate"] is True
+    assert result["duplicate_id"] == "vuln-0001"
+
+
 async def test_dependency_dedupe_detects_legacy_same_cve_package() -> None:
     existing = [
         {
@@ -559,6 +872,8 @@ def test_vuln_tool_exposes_new_params() -> None:
     dep_props = create_dependency_report.params_json_schema["properties"]
     for field in ("package_name", "installed_version", "cve", "advisory_cvss"):
         assert field in dep_props
+    for field in ("reachability", "reachability_evidence", "manifest_path"):
+        assert field in dep_props
     dep_required = create_dependency_report.params_json_schema["required"]
     assert "package_ecosystem" in dep_required
     assert "advisory_cvss" in dep_required

tests/test_stream_idle_timeout.py

@@ -0,0 +1,173 @@
+"""Tests for the model-stream idle watchdog.
+
+A turn that streams a few tokens and then goes silent is not covered by the
+request timeout: the read timeout resets on every byte, keepalives included.
+The watchdog bounds the gap between events so the turn fails and can be
+retried instead of parking the agent forever.
+"""
+
+from __future__ import annotations
+
+import asyncio
+import json
+import threading
+import time
+from http.server import BaseHTTPRequestHandler, HTTPServer
+from typing import TYPE_CHECKING, Any
+
+import pytest
+from agents.model_settings import ModelSettings
+from agents.models.interface import Model, ModelTracing
+from agents.models.openai_chatcompletions import OpenAIChatCompletionsModel
+from openai import AsyncOpenAI
+
+from strix.config import loader
+from strix.config.loader import load_settings
+from strix.config.models import StrixProvider, _TurnGuardModel, _with_idle_timeout
+
+
+if TYPE_CHECKING:
+    from collections.abc import AsyncIterator, Iterator
+
+
+_STALL_SECONDS = 30.0
+
+
+def _chunk(text: str) -> bytes:
+    payload = {
+        "id": "chatcmpl-1",
+        "object": "chat.completion.chunk",
+        "created": 0,
+        "model": "gw-model",
+        "choices": [{"index": 0, "delta": {"content": text}, "finish_reason": None}],
+    }
+    return b"data: " + json.dumps(payload).encode() + b"\n\n"
+
+
+class _StallingHandler(BaseHTTPRequestHandler):
+    """Streams a couple of tokens, then stops producing anything."""
+
+    stop = threading.Event()
+
+    def log_message(self, *args: Any) -> None:
+        pass
+
+    def do_POST(self) -> None:
+        length = int(self.headers.get("Content-Length", 0))
+        self.rfile.read(length)
+        self.send_response(200)
+        self.send_header("Content-Type", "text/event-stream")
+        self.end_headers()
+        self.wfile.write(_chunk("Now"))
+        self.wfile.write(_chunk(" spawning"))
+        self.wfile.flush()
+        self.stop.wait(_STALL_SECONDS)
+
+
+@pytest.fixture
+def stalling_gateway() -> Iterator[str]:
+    _StallingHandler.stop.clear()
+    server = HTTPServer(("127.0.0.1", 0), _StallingHandler)
+    thread = threading.Thread(target=server.serve_forever, daemon=True)
+    thread.start()
+    try:
+        yield f"http://127.0.0.1:{server.server_address[1]}/v1"
+    finally:
+        _StallingHandler.stop.set()
+        server.shutdown()
+        server.server_close()
+
+
+def _stream(base_url: str, *, idle_timeout: float) -> AsyncIterator[Any]:
+    client = AsyncOpenAI(api_key="tok", base_url=base_url, max_retries=0, timeout=_STALL_SECONDS)
+    inner: Model = OpenAIChatCompletionsModel(model="gw-model", openai_client=client)
+    guarded = _TurnGuardModel(inner, stream_idle_timeout=idle_timeout)
+    return guarded.stream_response(
+        None,
+        "go",
+        ModelSettings(),
+        [],
+        None,
+        [],
+        ModelTracing.DISABLED,
+        previous_response_id=None,
+        conversation_id=None,
+        prompt=None,
+    )
+
+
+async def _drain(base_url: str, *, idle_timeout: float) -> list[Any]:
+    return [event async for event in _stream(base_url, idle_timeout=idle_timeout)]
+
+
+@pytest.mark.asyncio
+async def test_stalled_stream_hangs_without_the_watchdog(stalling_gateway: str) -> None:
+    # Repro: tokens arrive, then nothing. Un-watched, the turn just sits there;
+    # the request timeout is far away and would reset on any keepalive byte.
+    with pytest.raises(TimeoutError):
+        await asyncio.wait_for(_drain(stalling_gateway, idle_timeout=0), timeout=2)
+
+
+@pytest.mark.asyncio
+async def test_stalled_stream_is_abandoned_by_the_watchdog(stalling_gateway: str) -> None:
+    started = time.monotonic()
+    with pytest.raises(TimeoutError, match="produced no event"):
+        await _drain(stalling_gateway, idle_timeout=1)
+
+    assert time.monotonic() - started < _STALL_SECONDS
+
+
+@pytest.mark.asyncio
+async def test_events_keep_flowing_while_the_stream_is_alive() -> None:
+    async def _live() -> AsyncIterator[Any]:
+        for i in range(5):
+            await asyncio.sleep(0.05)
+            yield f"event-{i}"
+
+    seen: list[Any] = [event async for event in _with_idle_timeout(_live(), 1.0)]
+
+    assert seen == [f"event-{i}" for i in range(5)]
+
+
+@pytest.fixture
+def _reset_settings(monkeypatch: pytest.MonkeyPatch) -> Iterator[None]:
+    for key in ("STRIX_LLM", "LLM_DISABLE_STREAMING", "LLM_STREAM_IDLE_TIMEOUT"):
+        monkeypatch.delenv(key, raising=False)
+    monkeypatch.setattr(loader, "_cached", None)
+    monkeypatch.setattr(loader, "_override", None)
+    yield
+
+
+class _DummyModel(Model):
+    async def get_response(self, *args: Any, **kwargs: Any) -> Any:
+        raise NotImplementedError
+
+    def stream_response(self, *args: Any, **kwargs: Any) -> Any:
+        raise NotImplementedError
+
+
+def test_idle_timeout_is_configurable(
+    monkeypatch: pytest.MonkeyPatch, _reset_settings: None
+) -> None:
+    monkeypatch.setattr("strix.config.models.MultiProvider.get_model", lambda *_: _DummyModel())
+    monkeypatch.setenv("LLM_STREAM_IDLE_TIMEOUT", "45")
+    load_settings()
+
+    model = StrixProvider().get_model("openai/gpt-4o-mini")
+    assert isinstance(model, _TurnGuardModel)
+    assert model._stream_idle_timeout == 45
+
+
+def test_idle_timeout_is_off_without_streaming(
+    monkeypatch: pytest.MonkeyPatch, _reset_settings: None
+) -> None:
+    # LLM_DISABLE_STREAMING turns the whole request into one event, so an idle
+    # gap would just be the request duration — the request timeout bounds that.
+    monkeypatch.setattr("strix.config.models.MultiProvider.get_model", lambda *_: _DummyModel())
+    monkeypatch.setenv("LLM_STREAM_IDLE_TIMEOUT", "45")
+    monkeypatch.setenv("LLM_DISABLE_STREAMING", "true")
+    load_settings()
+
+    model = StrixProvider().get_model("openai/gpt-4o-mini")
+    assert isinstance(model, _TurnGuardModel)
+    assert model._stream_idle_timeout == 0

tests/test_tool_call_ids.py

@@ -0,0 +1,249 @@
+"""Tests for tool-call id uniqueness.
+
+Providers that number tool calls per turn (``exec_command:0``, ``:1``, ...)
+restart the counter on every turn, so the same id eventually appears twice in
+one conversation. Strict providers then reject the whole request, and because
+the history is replayed on every retry the agent can never recover. A gateway
+that validates id uniqueness the way those providers do proves both the
+failure and the fix.
+"""
+
+from __future__ import annotations
+
+import json
+import threading
+from http.server import BaseHTTPRequestHandler, HTTPServer
+from typing import TYPE_CHECKING, Any
+
+import pytest
+from agents import Agent, Runner, function_tool
+from agents.models.interface import Model, ModelProvider
+from agents.models.openai_chatcompletions import OpenAIChatCompletionsModel
+from agents.run import RunConfig
+from openai import AsyncOpenAI
+from openai.types.responses import ResponseFunctionToolCall
+
+from strix.config.models import _NonStreamingModel, _TurnGuardModel
+from strix.config.tool_call_ids import TurnCallIdRewriter, dedupe_history_call_ids
+
+
+if TYPE_CHECKING:
+    from collections.abc import Iterator
+
+
+def _tool_call_completion(call_id: str, n: int = 1) -> dict[str, Any]:
+    return {
+        "id": "chatcmpl-1",
+        "object": "chat.completion",
+        "created": 0,
+        "model": "gw-model",
+        "choices": [
+            {
+                "index": 0,
+                "finish_reason": "tool_calls",
+                "message": {
+                    "role": "assistant",
+                    "content": None,
+                    "tool_calls": [
+                        {
+                            "id": call_id,
+                            "type": "function",
+                            "function": {"name": "do_thing", "arguments": json.dumps({"n": n})},
+                        }
+                    ],
+                },
+            }
+        ],
+        "usage": {"prompt_tokens": 5, "completion_tokens": 2, "total_tokens": 7},
+    }
+
+
+def _text_completion(text: str) -> dict[str, Any]:
+    return {
+        "id": "chatcmpl-2",
+        "object": "chat.completion",
+        "created": 0,
+        "model": "gw-model",
+        "choices": [
+            {"index": 0, "finish_reason": "stop", "message": {"role": "assistant", "content": text}}
+        ],
+        "usage": {"prompt_tokens": 5, "completion_tokens": 3, "total_tokens": 8},
+    }
+
+
+_REQUESTS: list[list[dict[str, Any]]] = []
+
+
+def _assistant_call_ids(messages: list[dict[str, Any]]) -> list[str]:
+    return [str(call.get("id")) for message in messages for call in message.get("tool_calls") or []]
+
+
+def _tool_results(messages: list[dict[str, Any]]) -> list[str]:
+    return [str(m.get("content")) for m in messages if m.get("role") == "tool"]
+
+
+class _StrictHandler(BaseHTTPRequestHandler):
+    """Gateway that rejects a history reusing a tool-call id, like strict providers do."""
+
+    def log_message(self, *args: Any) -> None:
+        pass
+
+    def do_POST(self) -> None:
+        length = int(self.headers.get("Content-Length", 0))
+        body = json.loads(self.rfile.read(length) or b"{}")
+        messages = body.get("messages", [])
+        _REQUESTS.append(messages)
+        call_ids = _assistant_call_ids(messages)
+
+        if len(call_ids) != len(set(call_ids)):
+            self._respond(
+                400,
+                {
+                    "error": {
+                        "message": (
+                            "tool messages need a resolvable tool name: carry `tool`/`name`, "
+                            "or match a preceding assistant tool_call by order"
+                        )
+                    }
+                },
+            )
+            return
+
+        turn = len(_REQUESTS)
+        if turn <= 2:
+            # The provider restarts its per-turn counter, so both turns say ":0".
+            self._respond(200, _tool_call_completion("exec_command:0", n=turn))
+        else:
+            self._respond(200, _text_completion("all done"))
+
+    def _respond(self, status: int, payload: dict[str, Any]) -> None:
+        encoded = json.dumps(payload).encode()
+        self.send_response(status)
+        self.send_header("Content-Type", "application/json")
+        self.send_header("Content-Length", str(len(encoded)))
+        self.end_headers()
+        self.wfile.write(encoded)
+
+
+@pytest.fixture
+def strict_gateway() -> Iterator[str]:
+    _REQUESTS.clear()
+    server = HTTPServer(("127.0.0.1", 0), _StrictHandler)
+    thread = threading.Thread(target=server.serve_forever, daemon=True)
+    thread.start()
+    try:
+        yield f"http://127.0.0.1:{server.server_address[1]}/v1"
+    finally:
+        server.shutdown()
+        server.server_close()
+
+
+def _model(base_url: str) -> Model:
+    # The gateway answers plain JSON, so the run loop's streamed turns are
+    # served non-streamed; the ids on the wire are the same either way.
+    client = AsyncOpenAI(api_key="tok", base_url=base_url, max_retries=0)
+    return _NonStreamingModel(OpenAIChatCompletionsModel(model="gw-model", openai_client=client))
+
+
+async def _run_agent(base_url: str, *, wrap: bool) -> Any:
+    @function_tool
+    def do_thing(n: int) -> str:
+        return f"did {n}"
+
+    class _Provider(ModelProvider):
+        def get_model(self, model_name: str | None) -> Model:  # noqa: ARG002
+            model = _model(base_url)
+            return _TurnGuardModel(model) if wrap else model
+
+    agent = Agent(name="t", instructions="use the tool", tools=[do_thing], model="gw-model")
+    result = Runner.run_streamed(
+        agent, input="please", run_config=RunConfig(model_provider=_Provider())
+    )
+    async for _ in result.stream_events():
+        pass
+    return result
+
+
+@pytest.mark.asyncio
+async def test_recycled_call_id_erases_a_turn_without_the_wrapper(strict_gateway: str) -> None:
+    # Repro: two turns run a tool and both are labelled ``exec_command:0``, so
+    # the colliding call and its result are dropped as duplicates. The agent
+    # ends the run having silently lost a turn of its own work — and a provider
+    # that does not drop them instead rejects the malformed history outright.
+    result = await _run_agent(strict_gateway, wrap=False)
+
+    assert result.final_output == "all done"
+    assert _assistant_call_ids(_REQUESTS[-1]) == ["exec_command:0"]
+    assert _tool_results(_REQUESTS[-1]) == ["did 2"]
+
+
+@pytest.mark.asyncio
+async def test_recycled_call_id_is_rewritten_so_no_turn_is_lost(strict_gateway: str) -> None:
+    result = await _run_agent(strict_gateway, wrap=True)
+
+    assert result.final_output == "all done"
+    call_ids = _assistant_call_ids(_REQUESTS[-1])
+    assert len(call_ids) == len(set(call_ids)) == 2
+    assert call_ids[0] == "exec_command:0"
+    assert call_ids[1].startswith("call_")
+    assert _tool_results(_REQUESTS[-1]) == ["did 1", "did 2"]
+
+
+def test_history_dedupe_keeps_outputs_paired_with_their_call() -> None:
+    items = [
+        {"type": "function_call", "call_id": "exec_command:0", "name": "a", "arguments": "{}"},
+        {"type": "function_call_output", "call_id": "exec_command:0", "output": "first"},
+        {"type": "function_call", "call_id": "exec_command:0", "name": "b", "arguments": "{}"},
+        {"type": "function_call_output", "call_id": "exec_command:0", "output": "second"},
+    ]
+
+    rebuilt, changed = dedupe_history_call_ids(items)
+
+    assert changed
+    ids = [item["call_id"] for item in rebuilt]
+    assert ids[0] == ids[1] == "exec_command:0"
+    assert ids[2] == ids[3] != "exec_command:0"
+    assert rebuilt[3]["output"] == "second"
+
+
+def test_history_dedupe_pairs_parallel_calls_by_order() -> None:
+    items = [
+        {"type": "function_call", "call_id": "dup", "name": "a", "arguments": "{}"},
+        {"type": "function_call", "call_id": "dup", "name": "b", "arguments": "{}"},
+        {"type": "function_call_output", "call_id": "dup", "output": "for-a"},
+        {"type": "function_call_output", "call_id": "dup", "output": "for-b"},
+    ]
+
+    rebuilt, changed = dedupe_history_call_ids(items)
+
+    assert changed
+    assert rebuilt[0]["call_id"] == rebuilt[2]["call_id"] == "dup"
+    assert rebuilt[1]["call_id"] == rebuilt[3]["call_id"]
+    assert rebuilt[1]["call_id"] != "dup"
+
+
+def test_history_dedupe_leaves_unique_ids_alone() -> None:
+    items = [
+        {"type": "function_call", "call_id": "call_a", "name": "a", "arguments": "{}"},
+        {"type": "function_call_output", "call_id": "call_a", "output": "x"},
+        {"type": "function_call", "call_id": "call_b", "name": "b", "arguments": "{}"},
+    ]
+
+    rebuilt, changed = dedupe_history_call_ids(items)
+
+    assert not changed
+    assert rebuilt == items
+
+
+def test_turn_rewriter_is_stable_across_repeated_sightings() -> None:
+    history = [{"type": "function_call", "call_id": "exec_command:0", "name": "a"}]
+    rewriter = TurnCallIdRewriter(history)
+    call = ResponseFunctionToolCall(
+        call_id="exec_command:0", name="a", arguments="{}", type="function_call"
+    )
+
+    first = rewriter.rewrite_item(call)
+    second = rewriter.rewrite_item(first)
+
+    assert first.call_id != "exec_command:0"
+    assert second.call_id == first.call_id

tests/test_tool_call_limits.py

@@ -0,0 +1,189 @@
+"""Tests for the per-response tool-call cap.
+
+A degenerate generation can emit hundreds of tool calls in one assistant
+response — a wait/poll loop the model writes out ahead of time. The run loop
+honours every one of them, so the agent stops reacting for hours. The cap
+keeps the first N calls of a response and drops the tail.
+"""
+
+from __future__ import annotations
+
+import json
+import threading
+from http.server import BaseHTTPRequestHandler, HTTPServer
+from typing import TYPE_CHECKING, Any
+
+import pytest
+from agents import Agent, Runner, function_tool
+from agents.models.interface import Model, ModelProvider
+from agents.models.openai_chatcompletions import OpenAIChatCompletionsModel
+from agents.run import RunConfig
+from openai import AsyncOpenAI
+
+from strix.config import loader
+from strix.config.loader import load_settings
+from strix.config.models import StrixProvider, _NonStreamingModel, _TurnGuardModel
+
+
+if TYPE_CHECKING:
+    from collections.abc import Iterator
+
+
+_RUNAWAY_CALLS = 200
+_CAP = 32
+
+
+def _runaway_completion() -> dict[str, Any]:
+    return {
+        "id": "chatcmpl-1",
+        "object": "chat.completion",
+        "created": 0,
+        "model": "gw-model",
+        "choices": [
+            {
+                "index": 0,
+                "finish_reason": "tool_calls",
+                "message": {
+                    "role": "assistant",
+                    "content": None,
+                    "tool_calls": [
+                        {
+                            "id": f"call_{i}",
+                            "type": "function",
+                            "function": {"name": "wait_for_message", "arguments": "{}"},
+                        }
+                        for i in range(_RUNAWAY_CALLS)
+                    ],
+                },
+            }
+        ],
+        "usage": {"prompt_tokens": 5, "completion_tokens": 2, "total_tokens": 7},
+    }
+
+
+def _text_completion() -> dict[str, Any]:
+    return {
+        "id": "chatcmpl-2",
+        "object": "chat.completion",
+        "created": 0,
+        "model": "gw-model",
+        "choices": [
+            {
+                "index": 0,
+                "finish_reason": "stop",
+                "message": {"role": "assistant", "content": "done"},
+            }
+        ],
+        "usage": {"prompt_tokens": 5, "completion_tokens": 3, "total_tokens": 8},
+    }
+
+
+_TURNS: list[int] = []
+
+
+class _RunawayHandler(BaseHTTPRequestHandler):
+    """First turn queues a huge poll loop; the next turn ends the run."""
+
+    def log_message(self, *args: Any) -> None:
+        pass
+
+    def do_POST(self) -> None:
+        length = int(self.headers.get("Content-Length", 0))
+        self.rfile.read(length)
+        _TURNS.append(1)
+        payload = _runaway_completion() if len(_TURNS) == 1 else _text_completion()
+        encoded = json.dumps(payload).encode()
+        self.send_response(200)
+        self.send_header("Content-Type", "application/json")
+        self.send_header("Content-Length", str(len(encoded)))
+        self.end_headers()
+        self.wfile.write(encoded)
+
+
+@pytest.fixture
+def runaway_gateway() -> Iterator[str]:
+    _TURNS.clear()
+    server = HTTPServer(("127.0.0.1", 0), _RunawayHandler)
+    thread = threading.Thread(target=server.serve_forever, daemon=True)
+    thread.start()
+    try:
+        yield f"http://127.0.0.1:{server.server_address[1]}/v1"
+    finally:
+        server.shutdown()
+        server.server_close()
+
+
+def _model(base_url: str) -> Model:
+    client = AsyncOpenAI(api_key="tok", base_url=base_url, max_retries=0)
+    return _NonStreamingModel(OpenAIChatCompletionsModel(model="gw-model", openai_client=client))
+
+
+async def _run_agent(base_url: str, *, cap: int) -> list[int]:
+    executed: list[int] = []
+
+    @function_tool
+    def wait_for_message() -> str:
+        executed.append(1)
+        return "nothing new"
+
+    class _Provider(ModelProvider):
+        def get_model(self, model_name: str | None) -> Model:  # noqa: ARG002
+            return _TurnGuardModel(_model(base_url), max_tool_calls_per_turn=cap)
+
+    agent = Agent(name="t", instructions="orchestrate", tools=[wait_for_message], model="gw-model")
+    result = Runner.run_streamed(
+        agent, input="go", run_config=RunConfig(model_provider=_Provider())
+    )
+    async for _ in result.stream_events():
+        pass
+    assert result.final_output == "done"
+    return executed
+
+
+@pytest.mark.asyncio
+async def test_runaway_response_runs_every_queued_call_when_uncapped(runaway_gateway: str) -> None:
+    # Repro: one response queues 200 calls and the run loop honours all of them.
+    executed = await _run_agent(runaway_gateway, cap=0)
+
+    assert len(executed) == _RUNAWAY_CALLS
+
+
+@pytest.mark.asyncio
+async def test_runaway_response_is_capped(runaway_gateway: str) -> None:
+    executed = await _run_agent(runaway_gateway, cap=_CAP)
+
+    assert len(executed) == _CAP
+
+
+@pytest.mark.asyncio
+async def test_response_below_the_cap_is_untouched(runaway_gateway: str) -> None:
+    executed = await _run_agent(runaway_gateway, cap=_RUNAWAY_CALLS + 1)
+
+    assert len(executed) == _RUNAWAY_CALLS
+
+
+@pytest.fixture
+def _reset_settings(monkeypatch: pytest.MonkeyPatch) -> Iterator[None]:
+    for key in ("STRIX_LLM", "LLM_DISABLE_STREAMING", "LLM_MAX_TOOL_CALLS_PER_TURN"):
+        monkeypatch.delenv(key, raising=False)
+    monkeypatch.setattr(loader, "_cached", None)
+    monkeypatch.setattr(loader, "_override", None)
+    yield
+
+
+class _DummyModel(Model):
+    async def get_response(self, *args: Any, **kwargs: Any) -> Any:
+        raise NotImplementedError
+
+    def stream_response(self, *args: Any, **kwargs: Any) -> Any:
+        raise NotImplementedError
+
+
+def test_cap_is_configurable(monkeypatch: pytest.MonkeyPatch, _reset_settings: None) -> None:
+    monkeypatch.setattr("strix.config.models.MultiProvider.get_model", lambda *_: _DummyModel())
+    monkeypatch.setenv("LLM_MAX_TOOL_CALLS_PER_TURN", "7")
+    load_settings()
+
+    model = StrixProvider().get_model("openai/gpt-4o-mini")
+    assert isinstance(model, _TurnGuardModel)
+    assert model._max_tool_calls_per_turn == 7

tests/test_wait_dedupe.py

@@ -0,0 +1,126 @@
+"""Tests for collapsing repeated waits queued inside one model turn.
+
+An orchestrator that writes out its whole poll loop ahead of time queues
+many ``wait_for_agents`` calls in a single response. Each one parks for its
+full timeout, so the agent stops reacting for hours while its children run
+unsupervised. Only the first wait of a turn parks; the rest return at once.
+"""
+
+from __future__ import annotations
+
+import asyncio
+import json
+import time
+from typing import TYPE_CHECKING, Any, cast
+
+import pytest
+from agents import RunContextWrapper
+from agents.tool_context import ToolContext
+
+from strix.core.agents import AgentCoordinator
+from strix.core.hooks import LLM_TURN_KEY, ReportUsageHooks
+from strix.tools.agents_graph.tools import wait_for_agents
+
+
+if TYPE_CHECKING:
+    from collections.abc import Iterator
+
+
+_WAIT_SECONDS = 2
+
+
+@pytest.fixture
+def _fast_wait(monkeypatch: pytest.MonkeyPatch) -> Iterator[None]:
+    # The real ceiling is 300s per wait; the shape of the bug is the same.
+    monkeypatch.setattr(
+        "strix.tools.agents_graph.tools._WAIT_DEFAULT_TIMEOUT_S", _WAIT_SECONDS, raising=True
+    )
+    yield
+
+
+async def _context() -> dict[str, Any]:
+    coordinator = AgentCoordinator()
+    await coordinator.register("root", "strix", parent_id=None)
+    return {"agent_id": "root", "coordinator": coordinator}
+
+
+async def _wait(inner: dict[str, Any]) -> dict[str, Any]:
+    ctx = ToolContext(
+        context=inner,
+        tool_name="wait_for_agents",
+        tool_call_id="call-1",
+        tool_arguments="{}",
+    )
+    raw: str = await wait_for_agents.on_invoke_tool(
+        ctx, json.dumps({"reason": "waiting for wave 1", "timeout_seconds": _WAIT_SECONDS})
+    )
+    return cast("dict[str, Any]", json.loads(raw))
+
+
+@pytest.mark.asyncio
+async def test_waits_queued_in_one_turn_each_park_without_the_guard(_fast_wait: None) -> None:
+    # Repro: no turn marker in context (as before the fix) — every queued wait
+    # parks for its full timeout, so N waits cost N x timeout.
+    inner = await _context()
+
+    started = time.monotonic()
+    outcomes = [(await _wait(inner))["wait_outcome"] for _ in range(3)]
+    elapsed = time.monotonic() - started
+
+    assert outcomes == ["timeout", "timeout", "timeout"]
+    assert elapsed >= 3 * _WAIT_SECONDS
+
+
+@pytest.mark.asyncio
+async def test_repeated_waits_in_one_turn_are_collapsed(_fast_wait: None) -> None:
+    inner = await _context()
+    inner[LLM_TURN_KEY] = 1
+
+    started = time.monotonic()
+    outcomes = [(await _wait(inner))["wait_outcome"] for _ in range(3)]
+    elapsed = time.monotonic() - started
+
+    assert outcomes == ["timeout", "already_waited", "already_waited"]
+    assert elapsed < 2 * _WAIT_SECONDS
+
+
+@pytest.mark.asyncio
+async def test_a_wait_in_the_next_turn_still_parks(_fast_wait: None) -> None:
+    inner = await _context()
+    inner[LLM_TURN_KEY] = 1
+    assert (await _wait(inner))["wait_outcome"] == "timeout"
+    assert (await _wait(inner))["wait_outcome"] == "already_waited"
+
+    inner[LLM_TURN_KEY] = 2
+
+    assert (await _wait(inner))["wait_outcome"] == "timeout"
+
+
+@pytest.mark.asyncio
+async def test_each_model_turn_bumps_the_turn_marker() -> None:
+    hooks = ReportUsageHooks(model="gw-model")
+    context: RunContextWrapper[dict[str, Any]] = RunContextWrapper(context={})
+    agent = cast("Any", None)
+
+    await hooks.on_llm_start(context, agent, None, [])
+    await hooks.on_llm_start(context, agent, None, [])
+
+    assert context.context[LLM_TURN_KEY] == 2
+
+
+@pytest.mark.asyncio
+async def test_a_collapsed_wait_still_reports_arriving_messages(_fast_wait: None) -> None:
+    inner = await _context()
+    inner[LLM_TURN_KEY] = 1
+    coordinator = cast("AgentCoordinator", inner["coordinator"])
+
+    async def _send() -> None:
+        await asyncio.sleep(0.1)
+        await coordinator.send("root", {"type": "information", "content": "child done"})
+
+    task = asyncio.create_task(_send())
+    first = await _wait(inner)
+    await task
+
+    assert first["wait_outcome"] == "message_arrived"
+    assert (await _wait(inner))["wait_outcome"] == "already_waited"

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